Gentoo Archives: gentoo-commits

From: "Markus Dittrich (markusle)" <markusle@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/apbs/files: apbs-1.2.0-install-fix.patch apbs-1.2.0-link.patch apbs-1.2.0-contrib.patch apbs-examples-gentoo.patch apbs-gcc4-gentoo.patch
Date: Tue, 03 Nov 2009 05:30:09
Message-Id: E1N5By2-0007ei-Iq@stork.gentoo.org
1 markusle 09/11/03 05:30:06
2
3 Added: apbs-1.2.0-install-fix.patch apbs-1.2.0-link.patch
4 apbs-1.2.0-contrib.patch
5 Removed: apbs-examples-gentoo.patch apbs-gcc4-gentoo.patch
6 Log:
7 Version bump (fixes bug #262905) and removed old ebuilds.
8 (Portage version: 2.1.7.3/cvs/Linux x86_64)
9
10 Revision Changes Path
11 1.1 sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch
12
13 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch?rev=1.1&view=markup
14 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch?rev=1.1&content-type=text/plain
15
16 Index: apbs-1.2.0-install-fix.patch
17 ===================================================================
18 diff -Naur apbs-1.2-source/Makefile.am apbs-1.2-source.new/Makefile.am
19 --- apbs-1.2-source/Makefile.am 2009-10-14 13:20:55.000000000 -0400
20 +++ apbs-1.2-source.new/Makefile.am 2009-11-02 23:31:41.000000000 -0500
21 @@ -28,10 +28,19 @@
22 -rm -f ./bin/apbs
23
24 install-data-local:
25 - mkdir -p ${prefix}/share
26 - -cp -rf examples ${prefix}/share
27 - -cp -rf doc ${prefix}/share
28 - -cp -rf tools ${prefix}/share
29 + mkdir -p $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/examples
30 + mkdir -p $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/tools
31 + -rm -f doc/LICENSE.txt
32 + -rm -f tools/manip/*.pyc
33 + -rm -f tools/**/*.o
34 + -rm -f tools/**/Makefile*
35 + -rm -f tools/**/**/*.o
36 + -rm -f tools/**/**/Makefile*
37 + -rm -f tools/Makefile*
38 + -rm -f examples/Makefile*
39 + -rm -f examples/**/Makefile*
40 + -cp -rf examples $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/
41 + -cp -rf tools $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/
42
43 test:
44 cd examples; make test
45 diff -Naur apbs-1.2-source/bin/Makefile.am apbs-1.2-source.new/bin/Makefile.am
46 --- apbs-1.2-source/bin/Makefile.am 2009-10-14 13:20:48.000000000 -0400
47 +++ apbs-1.2-source.new/bin/Makefile.am 2009-11-02 23:31:15.000000000 -0500
48 @@ -40,6 +40,4 @@
49 include_HEADERS = routines.h
50
51 install-data-local:
52 - -cp -p ${top_apbsdir}/bin/ApbsClient.py ${prefix}/bin
53 - -chmod 755 ${prefix}/bin/ApbsClient.py
54 - -rm -f ${prefix}/bin/wsdl2py
55 \ No newline at end of file
56 + -rm -f $(DESTDIR)${prefix}/bin/wsdl2py
57
58
59
60 1.1 sci-chemistry/apbs/files/apbs-1.2.0-link.patch
61
62 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-link.patch?rev=1.1&view=markup
63 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-link.patch?rev=1.1&content-type=text/plain
64
65 Index: apbs-1.2.0-link.patch
66 ===================================================================
67 diff -Naur apbs-1.2-source/tools/python/Makefile.am apbs-1.2-source.new/tools/python/Makefile.am
68 --- apbs-1.2-source/tools/python/Makefile.am 2009-10-14 13:20:57.000000000 -0400
69 +++ apbs-1.2-source.new/tools/python/Makefile.am 2009-10-29 16:08:18.000000000 -0400
70 @@ -15,5 +15,5 @@
71
72 noinst_PROGRAMS = _apbslib.so
73 _apbslib_so_SOURCES = apbslib.c
74 -_apbslib_so_LINK = $(PY_CC) $(PY_LINKFLAGS) -o $@ $(PY_SHARED)
75 -_apbslib_so_LDADD = ${top_builddir}/bin/.libs/libapbsmainroutines.a ${top_builddir}/src/aaa_lib/.libs/libapbs.a ${top_builddir}/contrib/lib/libmaloc.a ${top_builddir}/contrib/blas/.libs/libapbsblas.a $(PY_LDFLAGS)
76 +_apbslib_so_LINK = $(PY_CC) $(PY_LINKFLAGS) $(LDFLAGS) -o $@ $(PY_SHARED)
77 +_apbslib_so_LDADD = ${top_builddir}/bin/.libs/libapbsmainroutines.a ${top_builddir}/src/aaa_lib/.libs/libapbs.a $(PY_LDFLAGS)
78 diff -Naur apbs-1.2-source/tools/python/vgrid/Makefile.am apbs-1.2-source.new/tools/python/vgrid/Makefile.am
79 --- apbs-1.2-source/tools/python/vgrid/Makefile.am 2009-10-14 13:20:57.000000000 -0400
80 +++ apbs-1.2-source.new/tools/python/vgrid/Makefile.am 2009-10-29 16:08:29.000000000 -0400
81 @@ -15,6 +15,6 @@
82 if PY_PRESENT
83 noinst_PROGRAMS = _vgrid.so
84 _vgrid_so_SOURCES = vgridlib.c
85 - _vgrid_so_LINK = $(PY_CC) $(PY_LINKFLAGS) -o $@ $(PY_SHARED)
86 - _vgrid_so_LDADD = ${top_builddir}/bin/.libs/libapbsmainroutines.a ${top_builddir}/src/aaa_lib/.libs/libapbs.a $(PY_LDFLAGS) ${top_builddir}/contrib/lib/libmaloc.a @lib_list@
87 + _vgrid_so_LINK = $(PY_CC) $(PY_LINKFLAGS) $(LDFLAGS) -o $@ $(PY_SHARED)
88 + _vgrid_so_LDADD = ${top_builddir}/bin/.libs/libapbsmainroutines.a ${top_builddir}/src/aaa_lib/.libs/libapbs.a @lib_list@
89 endif
90
91
92
93 1.1 sci-chemistry/apbs/files/apbs-1.2.0-contrib.patch
94
95 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-contrib.patch?rev=1.1&view=markup
96 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/files/apbs-1.2.0-contrib.patch?rev=1.1&content-type=text/plain
97
98 Index: apbs-1.2.0-contrib.patch
99 ===================================================================
100 --- contrib/Makefile.am 2009-03-05 21:30:09.000000000 +0100
101 +++ contrib/Makefile.am.new 2009-04-24 19:08:39.000000000 +0200
102 @@ -9,6 +9,6 @@
103 AUTOMAKE_OPTIONS = no-dependencies
104 SUFFIXES = .H .h .C .c .f .o
105
106 -always_built_SUBDIRS = @apbs_do_blas@ @apbs_do_maloc@ pmgZ aqua opal
107 +always_built_SUBDIRS = @apbs_do_blas@ @apbs_do_maloc@ pmgZ aqua
108
109 SUBDIRS = $(always_built_SUBDIRS) .