Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/repeatmasker/
Date: Tue, 31 Jan 2017 17:16:17
Message-Id: 1485882960.2ad8d135f344e32e7f1627bb293b776b36db9b80.mmokrejs@gentoo
1 commit: 2ad8d135f344e32e7f1627bb293b776b36db9b80
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Tue Jan 31 17:16:00 2017 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Tue Jan 31 17:16:00 2017 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2ad8d135
7
8 sci-biology/repeatmasker: respect EPREFIX
9
10 Package-Manager: Portage-2.3.3, Repoman-2.3.1
11
12 sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild | 16 ++++++++--------
13 1 file changed, 8 insertions(+), 8 deletions(-)
14
15 diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
16 index e0ad294..221c562 100644
17 --- a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
18 +++ b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
19 @@ -49,20 +49,20 @@ src_configure() {
20 echo "
21 env
22 \"${S}\"
23 -/opt/bin
24 +"${EPREFIX}"/opt/bin
25 1
26 -/usr/bin
27 +"${EPREFIX}"/usr/bin
28 Y
29 2
30 -/usr/bin
31 +"${EPREFIX}"/usr/bin
32 Y
33 4
34 -/usr/bin
35 +"${EPREFIX}"/usr/bin
36 Y
37 5" | "${S}/configure" || die "configure failed"
38 - sed -i -e 's|use lib $FindBin::RealBin;|use lib "/usr/share/'${PN}'/lib";|' \
39 - -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/Libraries/\1"|' \
40 - -e '/$REPEATMASKER_DIR/ s|$FindBin::RealBin|/usr/share/'${PN}'|' \
41 + sed -i -e "s|use lib $FindBin::RealBin;|use lib ${EPREFIX}/usr/share/${PN}/lib;|" \
42 + -e "s|.*\(taxonomy.dat\)|${EPREFIX}/usr/share/${PN}/Libraries/\1|" \
43 + -e "/$REPEATMASKER_DIR/ s|$FindBin::RealBin|${EPREFIX}/usr/share/${PN}|" \
44 "${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm} || die
45 }
46 # configure failed to 'cp RepeatMaskerConfig.tmpl RepeatMaskerConfig.pm'
47 @@ -97,7 +97,7 @@ pkg_postinst(){
48 einfo "from Dfam-1.0 database www.dfam.org"
49 einfo "You can configure which search search engine is to be used and"
50 einfo "PATHs to the search binaries are defined in"
51 - einfo "/usr/share/${PN}/lib/RepeatMaskerConfig.pm"
52 + einfo "${EPREFIX}/usr/share/${PN}/lib/RepeatMaskerConfig.pm"
53 einfo "Supported search engines are:"
54 optfeature "cross_match" sci-biology/phrap
55 optfeature "rmblast" sci-biology/rmblast