| 1 |
commit: e5ce90a04e79f6413604e96e4803cb95ada7c859 |
| 2 |
Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
| 3 |
AuthorDate: Wed Dec 16 08:48:45 2015 +0000 |
| 4 |
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
| 5 |
CommitDate: Wed Dec 16 08:49:12 2015 +0000 |
| 6 |
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e5ce90a0 |
| 7 |
|
| 8 |
dev-python/numpy: Fix linking to cblas and update docs |
| 9 |
|
| 10 |
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=567938 |
| 11 |
|
| 12 |
Package-Manager: portage-2.2.26 |
| 13 |
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> |
| 14 |
|
| 15 |
dev-python/numpy/Manifest | 3 + |
| 16 |
.../files/numpy-1.10.2-no-hardcode-blas.patch | 64 ++++++++++++++++++++++ |
| 17 |
.../numpy/files/numpy-1.9.2-no-hardcode-blas.patch | 37 +++++++++++-- |
| 18 |
...{numpy-1.10.2.ebuild => numpy-1.10.2-r1.ebuild} | 10 +--- |
| 19 |
4 files changed, 103 insertions(+), 11 deletions(-) |
| 20 |
|
| 21 |
diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest |
| 22 |
index 2ec2993..b3a1d88 100644 |
| 23 |
--- a/dev-python/numpy/Manifest |
| 24 |
+++ b/dev-python/numpy/Manifest |
| 25 |
@@ -3,9 +3,12 @@ DIST numpy-1.10.2.tar.gz 4055005 SHA256 23a3befdf955db4d616f8bb77b324680a80a323e |
| 26 |
DIST numpy-1.8.2.tar.gz 3792998 SHA256 6d487fc724780d66746bde264ea71f5cd77d3a39e52ee2b073dcaed63bc669db SHA512 996e6b8e2d42f223e44660f56bf73eb8ab124f400d89218f8f5e4d7c9860ada44a4d7c54526137b0695c7a10f36e8834fbf0d42b7cb20bcdb5d5c245d673385c WHIRLPOOL 0d3a05b1e3c0a1ceb0a7b4818406dbb45506e5f25bc2727d4ff44cc0a0520e6556b3c68ae24dbca37ba9d67ae2defbb3ff9c906d4c2635b29ed44452d70e8311 |
| 27 |
DIST numpy-1.9.2.tar.gz 3986067 SHA256 325e5f2b0b434ecb6e6882c7e1034cc6cdde3eeeea87dbc482575199a6aeef2a SHA512 70470ebb9afef5dfd0c83ceb7a9d5f1b7a072b1a9b54b04f04f5ed50fbaedd5b4906bd500472268d478f94df9e749a88698b1ff30f2d80258e7f3fec040617d9 WHIRLPOOL 59f5dc52cb95c7ce80fec3a7feac6cfda1d149596bf6d95c18bd8314e31a8df494b2b470c4cc3d8c296c9fc11c718d70d5b9b5344337175ca75496504c0fd201 |
| 28 |
DIST numpy-1.9.3.tar.gz 3984430 SHA256 c3b74d3b9da4ceb11f66abd21e117da8cf584b63a0efbd01a9b7e91b693fbbd6 SHA512 32531cd8d1480a50812454ef8e3b68c0f84b2a4bc5de0df1457070db7f6fd94cdb50e6479a85fa4d1dc569a10d28f6864d5069fcf2a32fa20fa8803476a3df8c WHIRLPOOL a0235594e793625d5e3cef57956f4710587158885f39d7d1267c9845b12fb1d39fb9987ec095720c2d285c7c726383a15471f3629b739b77186470e2c40ba093 |
| 29 |
+DIST numpy-html-1.10.1.zip 9663942 SHA256 4af48eb5abf2551f01d85aea7e9a99a30096777f02937dc185b16bb72a110366 SHA512 9d1f3619b801c88604a0495290da4ae8cfb4800257d549214363c554c1dc09a736425d594ed88f492afee6ae7c68fe5c166b9b3a8f24637ea41d67fd23b9d9f9 WHIRLPOOL d6c93e31e31c832fb21f117d03719e0375ee3d27fb6f7975bfcd12469df4a2ed0a25a16bd09a0e2113407446efc220e5bff534f7cd76a715c3d7df26c02f07a1 |
| 30 |
DIST numpy-html-1.8.1.zip 9703711 SHA256 f7fc3af4dba7b40deabd1828a86ea2e2eb5b9fa17c7ebddd73ee4cb8625105b1 SHA512 1d52c657931f4eebb5325159444aedd969b201f5098855058f1ef632dc8677372d632291154ebc3db9869cdb8abf7eb820eade1a9edba2d6be1ae918cb38c071 WHIRLPOOL e502b1416bad4b189773ba98035dfbeed0dc251d8f9b76e336450f14e8425caf92d55d2b1c2cc5ef9eb2d33eb2bf7cd55e720c1b265e45539b195fea1d7f046c |
| 31 |
DIST numpy-html-1.9.1.zip 9839137 SHA256 12a24937f8273fcf79090c99b6c4154a0ecfc378386498cf2afe727ea171407c SHA512 647a6be9f93995aca14185e283a2b412678c6e8080fe4f14e7cc9ee63c28eebb64dea6bbe28f30ef6850a5565dd1e06928fd660ac762e9a91454d309eff96ed4 WHIRLPOOL 68c367fd0416d27b1cf43edf7ca48bc8845c02856bbbacdf63c88fe8bbffd5dd86fb3e5cdea8f669dd78adf7bcc4d184953048783802df323126c1b22baf8e92 |
| 32 |
+DIST numpy-ref-1.10.1.pdf 5382006 SHA256 72ae03348d0375ff2f18056efd04e815cc1d27b738d0685c80f5204a496bc279 SHA512 25085eb7cb80343abffe04ee01ea93603427913ba4443fbfdaa1ef1ad07a8642c47259d0bb1cb91a9059f786c03395bba76f608c6f0a2fd26d1afec4847d885c WHIRLPOOL d904d9b2824bfb08a0eeffeb37f7d646d003c39230d950d387e2ddc8e475a117b8305a0ce3dc479be72f010b1a868f22ddfde17e6c4cd7c56630bbdf09afb90e |
| 33 |
DIST numpy-ref-1.8.1.pdf 5348248 SHA256 973851e66d0d5ab095f444f8aeb966fefe2dd544226395abbb110fc1b60f351d SHA512 340dd8f47430f24fea81bb3a8674e1a58f4290a9d1c5d64bac96d50b31a94a770e78381e42daf8b0a6a90cefe5cafe86b0c89f7cc7635a042a7e85eb74bdbdf5 WHIRLPOOL be13f88bb68944186c564a5c3789daededade240a26e7fb61c980a090249ab3a5b1f40805e97214168fbf0c099fb6b12d981ff313bace572f130023b29e7aaa7 |
| 34 |
DIST numpy-ref-1.9.1.pdf 5318122 SHA256 3c8e5881a3460e1cc9da95fe2167044e8f832ab8e980c3606d1f353e7ac6dcee SHA512 5171bb22588117a53e0eac355520581f7817a7e7a099ae83bb73f2ac8248a60e139ae9719dc543b44f25ccf8319c9f149fec1bf5aa55d943fad06a8e6da0d9ba WHIRLPOOL 5c99daf3ae2e6bf235aed287682f1b96d5b6afc9d290f544a8baab892b39c9f6dd9f649abe3e103cc90c990d87e4d653d8157d774a8bd35eccc9cc6ac7a870f9 |
| 35 |
+DIST numpy-user-1.10.1.pdf 406114 SHA256 5180a5a1333365e474aabba9d6edd25276e79179fd708bb3989d95dc4e76215f SHA512 998bce3777944e7b366c619e968ac4b6cc4351cd2819d6ecba7f422e20b6cd4d7332a8dede4036cd12e85b24c4c3d973bd9ef2d407610369c2591fce990fa8f4 WHIRLPOOL 4b53256663840738d288d38c4151e01ecfb515ebd4f69bb4330f4c5589642b3392a0a300f3def53df6bee8746f127a3af0d284601f288f4c4292df8b6de39f71 |
| 36 |
DIST numpy-user-1.8.1.pdf 408305 SHA256 be827f2d92ef86c3af7f59c623017e7bc23ee95c64f88e8c9871f3ad1f99b262 SHA512 9e646e89e7e67834fa596e43082b43842d1c59287d22fd8d20c9f0a1d3d56a518a08cc2c036de4972ad0d6d9d3c2f56e2210f76e7244d3f7547b5204d84d3c7c WHIRLPOOL bf4105093b208b35b1914e842821b8d289b46eb28f1fda110643f5970bbfafe801e9d148c5f535b43eba9a23e09d333e3aecd9a55b33e64827883d253477d19a |
| 37 |
DIST numpy-user-1.9.1.pdf 418111 SHA256 e1f6baed0b73f3d4b106c88924c083f9a519e860c1beb718830bf1aee1892232 SHA512 724302468a8e93daf70d379bb1ee7369953e297c40ea260f080b7aca3c9c81e619a81705bdfb2ea214da5b5325ec2b48e953eceeaa1d60c07593b00c35989f45 WHIRLPOOL f93ed20c5da7b379e3afcafab97c7eb60231ed4f73cebf18184e00b9a8a5a531fa32992f7f28f16d2714b3056c61153c29267c8c6b93cb100e06f53bced1bd6a |
| 38 |
|
| 39 |
diff --git a/dev-python/numpy/files/numpy-1.10.2-no-hardcode-blas.patch b/dev-python/numpy/files/numpy-1.10.2-no-hardcode-blas.patch |
| 40 |
new file mode 100644 |
| 41 |
index 0000000..db4a47d |
| 42 |
--- /dev/null |
| 43 |
+++ b/dev-python/numpy/files/numpy-1.10.2-no-hardcode-blas.patch |
| 44 |
@@ -0,0 +1,64 @@ |
| 45 |
+ numpy/distutils/system_info.py | 29 +++++------------------------ |
| 46 |
+ 1 file changed, 5 insertions(+), 24 deletions(-) |
| 47 |
+ |
| 48 |
+diff --git a/numpy/distutils/system_info.py b/numpy/distutils/system_info.py |
| 49 |
+index d7eb49e..aa62b09 100644 |
| 50 |
+--- a/numpy/distutils/system_info.py |
| 51 |
++++ b/numpy/distutils/system_info.py |
| 52 |
+@@ -306,26 +306,7 @@ def get_info(name, notfound_action=0): |
| 53 |
+ 1 - display warning message |
| 54 |
+ 2 - raise error |
| 55 |
+ """ |
| 56 |
+- cl = {'atlas': atlas_info, # use lapack_opt or blas_opt instead |
| 57 |
+- 'atlas_threads': atlas_threads_info, # ditto |
| 58 |
+- 'atlas_blas': atlas_blas_info, |
| 59 |
+- 'atlas_blas_threads': atlas_blas_threads_info, |
| 60 |
+- 'lapack_atlas': lapack_atlas_info, # use lapack_opt instead |
| 61 |
+- 'lapack_atlas_threads': lapack_atlas_threads_info, # ditto |
| 62 |
+- 'atlas_3_10': atlas_3_10_info, # use lapack_opt or blas_opt instead |
| 63 |
+- 'atlas_3_10_threads': atlas_3_10_threads_info, # ditto |
| 64 |
+- 'atlas_3_10_blas': atlas_3_10_blas_info, |
| 65 |
+- 'atlas_3_10_blas_threads': atlas_3_10_blas_threads_info, |
| 66 |
+- 'lapack_atlas_3_10': lapack_atlas_3_10_info, # use lapack_opt instead |
| 67 |
+- 'lapack_atlas_3_10_threads': lapack_atlas_3_10_threads_info, # ditto |
| 68 |
+- 'mkl': mkl_info, |
| 69 |
+- # openblas which may or may not have embedded lapack |
| 70 |
+- 'openblas': openblas_info, # use blas_opt instead |
| 71 |
+- # openblas with embedded lapack |
| 72 |
+- 'openblas_lapack': openblas_lapack_info, # use blas_opt instead |
| 73 |
+- 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead |
| 74 |
+- 'blas_mkl': blas_mkl_info, # use blas_opt instead |
| 75 |
+- 'x11': x11_info, |
| 76 |
++ cl = {'x11': x11_info, |
| 77 |
+ 'fft_opt': fft_opt_info, |
| 78 |
+ 'fftw': fftw_info, |
| 79 |
+ 'fftw2': fftw2_info, |
| 80 |
+@@ -1690,7 +1671,7 @@ class blas_info(system_info): |
| 81 |
+ lib = self.has_cblas(info) |
| 82 |
+ if lib is not None: |
| 83 |
+ info['language'] = 'c' |
| 84 |
+- info['libraries'] = [lib] |
| 85 |
++ info['libraries'] = lib |
| 86 |
+ info['define_macros'] = [('HAVE_CBLAS', None)] |
| 87 |
+ self.set_info(**info) |
| 88 |
+ |
| 89 |
+@@ -1722,16 +1703,16 @@ class blas_info(system_info): |
| 90 |
+ # check for cblas lib, and if not present check for blas lib. |
| 91 |
+ try: |
| 92 |
+ c.link_executable(obj, os.path.join(tmpdir, "a.out"), |
| 93 |
+- libraries=["cblas"], |
| 94 |
++ libraries=info["libraries"], |
| 95 |
+ library_dirs=info['library_dirs'], |
| 96 |
+ extra_postargs=info.get('extra_link_args', [])) |
| 97 |
+- res = "cblas" |
| 98 |
++ res = info["libraries"] |
| 99 |
+ except distutils.ccompiler.LinkError: |
| 100 |
+ c.link_executable(obj, os.path.join(tmpdir, "a.out"), |
| 101 |
+ libraries=["blas"], |
| 102 |
+ library_dirs=info['library_dirs'], |
| 103 |
+ extra_postargs=info.get('extra_link_args', [])) |
| 104 |
+- res = "blas" |
| 105 |
++ res = ["blas"] |
| 106 |
+ except distutils.ccompiler.CompileError: |
| 107 |
+ res = None |
| 108 |
+ finally: |
| 109 |
|
| 110 |
diff --git a/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch b/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch |
| 111 |
index 674dbfa..db4a47d 100644 |
| 112 |
--- a/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch |
| 113 |
+++ b/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch |
| 114 |
@@ -1,11 +1,11 @@ |
| 115 |
- numpy/distutils/system_info.py | 21 +-------------------- |
| 116 |
- 1 file changed, 1 insertion(+), 20 deletions(-) |
| 117 |
+ numpy/distutils/system_info.py | 29 +++++------------------------ |
| 118 |
+ 1 file changed, 5 insertions(+), 24 deletions(-) |
| 119 |
|
| 120 |
diff --git a/numpy/distutils/system_info.py b/numpy/distutils/system_info.py |
| 121 |
-index a050430..d0878a5 100644 |
| 122 |
+index d7eb49e..aa62b09 100644 |
| 123 |
--- a/numpy/distutils/system_info.py |
| 124 |
+++ b/numpy/distutils/system_info.py |
| 125 |
-@@ -303,26 +303,7 @@ def get_info(name, notfound_action=0): |
| 126 |
+@@ -306,26 +306,7 @@ def get_info(name, notfound_action=0): |
| 127 |
1 - display warning message |
| 128 |
2 - raise error |
| 129 |
""" |
| 130 |
@@ -33,3 +33,32 @@ index a050430..d0878a5 100644 |
| 131 |
'fft_opt': fft_opt_info, |
| 132 |
'fftw': fftw_info, |
| 133 |
'fftw2': fftw2_info, |
| 134 |
+@@ -1690,7 +1671,7 @@ class blas_info(system_info): |
| 135 |
+ lib = self.has_cblas(info) |
| 136 |
+ if lib is not None: |
| 137 |
+ info['language'] = 'c' |
| 138 |
+- info['libraries'] = [lib] |
| 139 |
++ info['libraries'] = lib |
| 140 |
+ info['define_macros'] = [('HAVE_CBLAS', None)] |
| 141 |
+ self.set_info(**info) |
| 142 |
+ |
| 143 |
+@@ -1722,16 +1703,16 @@ class blas_info(system_info): |
| 144 |
+ # check for cblas lib, and if not present check for blas lib. |
| 145 |
+ try: |
| 146 |
+ c.link_executable(obj, os.path.join(tmpdir, "a.out"), |
| 147 |
+- libraries=["cblas"], |
| 148 |
++ libraries=info["libraries"], |
| 149 |
+ library_dirs=info['library_dirs'], |
| 150 |
+ extra_postargs=info.get('extra_link_args', [])) |
| 151 |
+- res = "cblas" |
| 152 |
++ res = info["libraries"] |
| 153 |
+ except distutils.ccompiler.LinkError: |
| 154 |
+ c.link_executable(obj, os.path.join(tmpdir, "a.out"), |
| 155 |
+ libraries=["blas"], |
| 156 |
+ library_dirs=info['library_dirs'], |
| 157 |
+ extra_postargs=info.get('extra_link_args', [])) |
| 158 |
+- res = "blas" |
| 159 |
++ res = ["blas"] |
| 160 |
+ except distutils.ccompiler.CompileError: |
| 161 |
+ res = None |
| 162 |
+ finally: |
| 163 |
|
| 164 |
diff --git a/dev-python/numpy/numpy-1.10.2.ebuild b/dev-python/numpy/numpy-1.10.2-r1.ebuild |
| 165 |
similarity index 95% |
| 166 |
rename from dev-python/numpy/numpy-1.10.2.ebuild |
| 167 |
rename to dev-python/numpy/numpy-1.10.2-r1.ebuild |
| 168 |
index 79f9a89..9dc68cd 100644 |
| 169 |
--- a/dev-python/numpy/numpy-1.10.2.ebuild |
| 170 |
+++ b/dev-python/numpy/numpy-1.10.2-r1.ebuild |
| 171 |
@@ -11,7 +11,7 @@ FORTRAN_NEEDED=lapack |
| 172 |
|
| 173 |
inherit distutils-r1 eutils flag-o-matic fortran-2 multilib multiprocessing toolchain-funcs versionator |
| 174 |
|
| 175 |
-DOC_PV="1.9.1" |
| 176 |
+DOC_PV="1.10.1" |
| 177 |
DOC_P="${PN}-${DOC_PV}" |
| 178 |
|
| 179 |
DESCRIPTION="Fast array and numerical python library" |
| 180 |
@@ -40,7 +40,7 @@ DEPEND="${RDEPEND} |
| 181 |
DISTUTILS_IN_SOURCE_BUILD=1 |
| 182 |
|
| 183 |
PATCHES=( |
| 184 |
- "${FILESDIR}"/${PN}-1.9.2-no-hardcode-blas.patch |
| 185 |
+ "${FILESDIR}"/${P}-no-hardcode-blas.patch |
| 186 |
) |
| 187 |
|
| 188 |
src_unpack() { |
| 189 |
@@ -110,13 +110,9 @@ python_prepare_all() { |
| 190 |
|
| 191 |
# we don't have f2py-3.3 |
| 192 |
sed \ |
| 193 |
- -e "/f2py_cmd/s:'f2py'.*:'f2py':g" \ |
| 194 |
+ -e "/f2py_cmd/s:'f2py'.*:'f2py'\]:g" \ |
| 195 |
-i numpy/tests/test_scripts.py || die |
| 196 |
|
| 197 |
- sed \ |
| 198 |
- -e "s:\"cblas\":\"$(pc_libs cblas)\":g" \ |
| 199 |
- -i numpy/distutils/system_info.py || die |
| 200 |
- |
| 201 |
distutils-r1_python_prepare_all |
| 202 |
} |
Archives