[gentoo-commits] gentoo-x86 commit in dev-python/numpy: numpy-1.8.0-r1.ebuild ChangeLog

[Justin Lecher (jlec)]

jlec        14/02/06 09:44:53

  Modified:             ChangeLog
  Added:                numpy-1.8.0-r1.ebuild
  Log:
  Backport fix for sec bug, #500484
  
  (Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)

Revision  Changes    Path
1.219                dev-python/numpy/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/dev-python/numpy/ChangeLog?rev=1.219&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/dev-python/numpy/ChangeLog?rev=1.219&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/dev-python/numpy/ChangeLog?r1=1.218&r2=1.219

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/dev-python/numpy/ChangeLog,v
retrieving revision 1.218
retrieving revision 1.219
diff -u -r1.218 -r1.219
--- ChangeLog	18 Jan 2014 12:16:02 -0000	1.218
+++ ChangeLog	6 Feb 2014 09:44:52 -0000	1.219
@@ -1,6 +1,12 @@
 # ChangeLog for dev-python/numpy
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/dev-python/numpy/ChangeLog,v 1.218 2014/01/18 12:16:02 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/dev-python/numpy/ChangeLog,v 1.219 2014/02/06 09:44:52 jlec Exp $
+
+*numpy-1.8.0-r1 (06 Feb 2014)
+
+  06 Feb 2014; Justin Lecher <jlec@g.o>
+  +files/numpy-1.8.0-f2py-insecure-temporary.patch, +numpy-1.8.0-r1.ebuild:
+  Backport fix for sec bug, #500484
 
   18 Jan 2014; Mike Frysinger <vapier@g.o> numpy-1.7.1.ebuild,
   numpy-1.8.0.ebuild:



1.1                  dev-python/numpy/numpy-1.8.0-r1.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/dev-python/numpy/numpy-1.8.0-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/dev-python/numpy/numpy-1.8.0-r1.ebuild?rev=1.1&content-type=text/plain

Index: numpy-1.8.0-r1.ebuild
===================================================================
# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/dev-python/numpy/numpy-1.8.0-r1.ebuild,v 1.1 2014/02/06 09:44:52 jlec Exp $

EAPI=5

PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )

FORTRAN_NEEDED=lapack

inherit distutils-r1 eutils flag-o-matic fortran-2 multilib toolchain-funcs versionator

DOC_PV="${PV}"

DESCRIPTION="Fast array and numerical python library"
HOMEPAGE="http://numpy.scipy.org/"
SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz
	doc? (
		http://docs.scipy.org/doc/${P}/${PN}-html-${DOC_PV}.zip
		http://docs.scipy.org/doc/${P}/${PN}-ref-${DOC_PV}.pdf
		http://docs.scipy.org/doc/${P}/${PN}-user-${DOC_PV}.pdf
	)"

LICENSE="BSD"
SLOT="0"
KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~x86-freebsd ~x86-interix ~amd64-linux ~arm-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
IUSE="doc lapack test"

RDEPEND="
	dev-python/setuptools[${PYTHON_USEDEP}]
	lapack? ( virtual/cblas virtual/lapack )"
DEPEND="${RDEPEND}
	doc? ( app-arch/unzip )
	lapack? ( virtual/pkgconfig )
	test? ( >=dev-python/nose-0.10[${PYTHON_USEDEP}] )"

# Uses distutils.command.config.
DISTUTILS_IN_SOURCE_BUILD=1

src_unpack() {
	unpack ${P}.tar.gz
	if use doc; then
		unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
	fi
}

pc_incdir() {
	$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
		sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//'
}

pc_libdir() {
	$(tc-getPKG_CONFIG) --libs-only-L $@ | \
		sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//'
}

pc_libs() {
	$(tc-getPKG_CONFIG) --libs-only-l $@ | \
		sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
		-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
		| sort | uniq | tr '\n' ','
}

python_prepare_all() {
	epatch \
		"${FILESDIR}"/${P}-no-hardcode-blas.patch \
		"${FILESDIR}"/${P}-f2py-insecure-temporary.patch

	if use lapack; then
		append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)"
		local libdir="${EPREFIX}"/usr/$(get_libdir)
		# make sure _dotblas.so gets built
		sed -i -e '/NO_ATLAS_INFO/,+1d' numpy/core/setup.py || die
		cat >> site.cfg <<-EOF
			[blas]
			include_dirs = $(pc_incdir cblas)
			library_dirs = $(pc_libdir cblas blas):${libdir}
			blas_libs = $(pc_libs cblas blas)
			[lapack]
			library_dirs = $(pc_libdir lapack):${libdir}
			lapack_libs = $(pc_libs lapack)
		EOF
	else
		export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None
	fi

	export CC="$(tc-getCC) ${CFLAGS}"

	append-flags -fno-strict-aliasing

	# See progress in http://projects.scipy.org/scipy/numpy/ticket/573
	# with the subtle difference that we don't want to break Darwin where
	# -shared is not a valid linker argument
	if [[ ${CHOST} != *-darwin* ]]; then
		append-ldflags -shared
	fi

	# only one fortran to link with:
	# linking with cblas and lapack library will force
	# autodetecting and linking to all available fortran compilers
	if use lapack; then
		append-fflags -fPIC
		NUMPY_FCONFIG="config_fc --noopt --noarch"
		# workaround bug 335908
		[[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95"
	fi

	# don't version f2py, we will handle it.
	sed -i -e '/f2py_exe/s:+os\.path.*$::' numpy/f2py/setup.py || die

	distutils-r1_python_prepare_all
}

python_compile() {
	distutils-r1_python_compile ${NUMPY_FCONFIG}
}

python_test() {
	distutils_install_for_testing ${NUMPY_FCONFIG}

	cd "${TMPDIR}" || die
	${EPYTHON} -c "
import numpy, sys
r = numpy.test(verbose=3)
sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}"
}

python_install() {
	distutils-r1_python_install ${NUMPY_FCONFIG}
}

python_install_all() {
	distutils-r1_python_install_all

	dodoc COMPATIBILITY DEV_README.txt THANKS.txt

	docinto f2py
	dodoc numpy/f2py/docs/*.txt
	doman numpy/f2py/f2py.1

	if use doc; then
		dohtml -r "${WORKDIR}"/html/*
		insinto /usr/share/doc/${PF}
		doins "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf
	fi
}