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jlec 10/04/25 09:53:47 |
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|
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Modified: ChangeLog |
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Added: pdb-extract-3.004-r1.ebuild |
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Removed: pdb-extract-3.004.ebuild |
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Log: |
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Add missing prefix.eclass |
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(Portage version: 2.2_rc67/cvs/Linux x86_64) |
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|
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Revision Changes Path |
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1.15 sci-chemistry/pdb-extract/ChangeLog |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?rev=1.15&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?rev=1.15&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?r1=1.14&r2=1.15 |
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|
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v |
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retrieving revision 1.14 |
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retrieving revision 1.15 |
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diff -u -r1.14 -r1.15 |
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--- ChangeLog 25 Apr 2010 09:52:44 -0000 1.14 |
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+++ ChangeLog 25 Apr 2010 09:53:47 -0000 1.15 |
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@@ -1,8 +1,11 @@ |
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# ChangeLog for sci-chemistry/pdb-extract |
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# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.14 2010/04/25 09:52:44 jlec Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.15 2010/04/25 09:53:47 jlec Exp $ |
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|
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- 25 Apr 2010; Justin Lecher <jlec@g.o> pdb-extract-3.004.ebuild: |
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+*pdb-extract-3.004-r1 (25 Apr 2010) |
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+ |
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+ 25 Apr 2010; Justin Lecher <jlec@g.o> -pdb-extract-3.004.ebuild, |
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+ +pdb-extract-3.004-r1.ebuild: |
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Add missing prefix.eclass |
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|
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05 Apr 2010; Justin Lecher <jlec@g.o> pdb-extract-3.004.ebuild, |
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|
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|
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1.1 sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: pdb-extract-3.004-r1.ebuild |
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=================================================================== |
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# Copyright 1999-2010 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v 1.1 2010/04/25 09:53:47 jlec Exp $ |
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|
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EAPI="3" |
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|
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inherit eutils toolchain-funcs multilib prefix |
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MY_P="${PN}-v${PV}-prod-src" |
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|
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DESCRIPTION="Tools for extracting mmCIF data from structure determination applications" |
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HOMEPAGE="http://sw-tools.pdb.org/apps/PDB_EXTRACT/index.html" |
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SRC_URI="http://sw-tools.pdb.org/apps/PDB_EXTRACT/${MY_P}.tar.gz" |
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|
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LICENSE="PDB" |
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SLOT="0" |
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KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" |
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IUSE="" |
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|
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RDEPEND="!<app-text/html-xml-utils-5.3" |
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DEPEND="${RDEPEND} |
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>=sci-libs/cifparse-obj-7.025" |
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|
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S="${WORKDIR}/${MY_P}" |
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|
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src_prepare() { |
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epatch "${FILESDIR}"/${P}-cflags-install.patch |
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epatch "${FILESDIR}"/${P}-gcc-4.3.patch |
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epatch "${FILESDIR}"/${P}-Makefile.patch |
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epatch "${FILESDIR}"/${P}-env.patch |
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|
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sed -i "s:GENTOOLIBDIR:$(get_libdir):g" \ |
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pdb-extract-v3.0/Makefile \ |
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|| die "Failed to fix libdir" |
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|
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# Get rid of unneeded directories, to make sure we use system files |
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ebegin "Deleting redundant directories" |
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rm -rf cif-file-v1.0 cifobj-common-v4.1 cifparse-obj-v7.0 \ |
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misclib-v2.2 regex-v2.2 tables-v8.0 |
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eend |
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|
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sed -i \ |
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-e "s:^\(CCC=\).*:\1$(tc-getCXX):g" \ |
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-e "s:^\(CC=\).*:\1$(tc-getCC):g" \ |
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-e "s:^\(GINCLUDES=\).*:\1-I${EPREFIX}/usr/include/cifparse-obj:g" \ |
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-e "s:^\(LIBDIR=\).*:\1${EPREFIX}/usr/$(get_libdir):g" \ |
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"${S}"/etc/make.* \ |
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|| die "Failed to fix makefiles" |
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|
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eprefixify pdb-extract-v3.0/Makefile etc/* |
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} |
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|
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src_compile() { |
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emake || die "make failed" |
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} |
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|
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src_install() { |
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dobin bin/pdb_extract{,_sf} \ |
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|| die "failed to install binaries" |
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newbin bin/extract extract-pdb \ |
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|| die "failed to rename extract binary" |
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dolib.a lib/pdb-extract.a \ |
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|| die "failed to install library" |
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insinto /usr/include/rcsb |
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doins include/* \ |
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|| die "failed to install include files" |
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dodoc README-source README \ |
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|| die "failed to install docs" |
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insinto /usr/lib/rcsb/pdb-extract-data |
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doins pdb-extract-data/* \ |
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|| die "failed to install data files" |
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|
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cat >> "${T}"/envd <<- EOF |
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PDB_EXTRACT="${EPREFIX}/usr/lib/rcsb/" |
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PDB_EXTRACT_ROOT="${EPREFIX}/usr/" |
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EOF |
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|
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newenvd "${T}"/envd 20pdb-extract \ |
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|| die "failed to install env files" |
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} |
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|
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pkg_postinst() { |
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ewarn "We moved extract to extract-pdb due to multiple collision of ${EROOT}usr/bin/extract" |
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} |
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