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commit: 4f3f4bc43e141b4afb302e101a5a3c675fd139d1 |
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Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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AuthorDate: Sat Mar 28 18:27:55 2015 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Sat Mar 28 18:27:55 2015 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4f3f4bc4 |
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|
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Moved to tree |
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Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> |
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eclass/emboss-r1.eclass | 133 ------------------------------------------------ |
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1 file changed, 133 deletions(-) |
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diff --git a/eclass/emboss-r1.eclass b/eclass/emboss-r1.eclass |
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deleted file mode 100644 |
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index fc92ce9..0000000 |
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--- a/eclass/emboss-r1.eclass |
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+++ /dev/null |
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@@ -1,133 +0,0 @@ |
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-# Copyright 1999-2015 Gentoo Foundation |
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-# Distributed under the terms of the GNU General Public License v2 |
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-# $Header: $ |
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- |
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-# @ECLASS: emboss-r1.eclass |
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-# @MAINTAINER: |
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-# sci-biology@g.o |
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-# jlec@g.o |
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-# ted.tanberry@×××××.com |
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-# @AUTHOR: |
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-# Original author: Author Olivier Fisette <ofisette@×××××.com> |
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-# Next gen author: Justin Lecher <jlec@g.o> |
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-# Next gen author: Ted Tanberry <ted.tanberry@×××××.com> |
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-# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons). |
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-# @DESCRIPTION: |
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-# The inheriting ebuild must set at least EAPI=5 and provide EBO_DESCRIPTION before the inherit line. |
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-# KEYWORDS should be set. Additionally "(R|P)DEPEND"encies and other standard |
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-# ebuild variables can be extended (FOO+=" bar"). |
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-# |
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-# Example: |
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-# |
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-# EAPI="5" |
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-# |
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-# EBO_DESCRIPTION="applications from the CBS group" |
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-# |
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-# inherit emboss-r1 |
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- |
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-# @ECLASS-VARIABLE: EBO_DESCRIPTION |
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-# @DESCRIPTION: |
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-# Should be set. Completes the generic description of the embassy module as follows: |
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-# |
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-# EMBOSS integrated version of ${EBO_DESCRIPTION}, |
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-# e.g. |
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-# "EMBOSS integrated version of applications from the CBS group" |
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-# |
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-# Defaults to the upstream name of the module. |
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- |
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-# @ECLASS-VARIABLE: EBO_EXTRA_ECONF |
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-# @DEFAULT_UNSET |
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-# @DESCRIPTION: |
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-# Extra config options passed to econf. |
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- |
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-case ${EAPI:-0} in |
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- 5) ;; |
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- *) die "this eclass doesn't support < EAPI 5" ;; |
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-esac |
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- |
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-inherit autotools-utils eutils flag-o-matic |
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- |
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-HOMEPAGE="http://emboss.sourceforge.net/" |
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-LICENSE="LGPL-2 GPL-2" |
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- |
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-SLOT="0" |
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-IUSE="mysql pdf png postgres static-libs X" |
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- |
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-DEPEND=" |
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- dev-libs/expat |
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- dev-libs/libpcre:3 |
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- sci-libs/plplot |
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- sys-libs/zlib |
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- mysql? ( virtual/mysql ) |
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- pdf? ( media-libs/libharu ) |
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- png? ( media-libs/gd[png] ) |
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- postgres? ( dev-db/postgresql:= ) |
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- X? ( x11-libs/libXt )" |
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-RDEPEND="${DEPEND}" |
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- |
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-if [[ ${PN} == embassy-* ]]; then |
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- EMBASSY_PACKAGE=yes |
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- # The EMBASSY package name, retrieved from the inheriting ebuild's name |
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- EN=${PN:8} |
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- # The full name and version of the EMBASSY package (excluding the Gentoo |
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- # revision number) |
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- EF=$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV} |
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- : ${EBO_DESCRIPTION:=${EN}} |
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- DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}" |
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- SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PVR}.tar.gz" |
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- DEPEND+=" >=sci-biology/emboss-6.6.0[mysql=,pdf=,png=,postgres=,static-libs=,X=]" |
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- |
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- S="${WORKDIR}"/${EF} |
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-fi |
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- |
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-# @FUNCTION: emboss_src_prepare |
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-# @DESCRIPTION: |
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-# Does the following things |
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-# |
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-# 1. Renames configure.in to configure.ac, if possible |
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-# 2. Applies ${PATCHES[@]} and runs autotools via autotools-utils.eclass |
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-# |
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- |
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-emboss-r1_src_prepare() { |
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- if [[ -e configure.in ]]; then |
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- mv configure.{in,ac} || die |
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- fi |
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- |
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- autotools-utils_src_prepare |
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-} |
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- |
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-# @FUNCTION: emboss_src_configure |
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-# @DESCRIPTION: |
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-# runs econf with following options. |
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-# |
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-# $(use_with X x) |
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-# $(use_with png pngdriver) |
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-# $(use_with pdf hpdf) |
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-# $(use_with mysql mysql) |
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-# $(use_with postgres postgresql) |
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-# $(use_enable static-libs static) |
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-# --enable-large |
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-# --without-java |
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-# --enable-systemlibs |
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-# ${EBO_EXTRA_ECONF} |
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- |
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-emboss-r1_src_configure() { |
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- local myeconfargs=( |
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- $(use_with X x) |
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- $(use_with png pngdriver "${EPREFIX}/usr") |
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- $(use_with pdf hpdf "${EPREFIX}/usr") |
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- $(use_with mysql mysql "${EPREFIX}/usr/bin/mysql_config") |
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- $(use_with postgres postgresql "${EPREFIX}/usr/bin/pg_config") |
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- --enable-large |
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- --without-java |
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- --enable-systemlibs |
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- ${EBO_EXTRA_ECONF} |
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- ) |
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- |
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- [[ ${EMBASSY_PACKAGE} == yes ]] && \ |
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- append-cppflags "-I${EPREFIX}/usr/include/emboss" |
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- |
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- autotools-utils_src_configure |
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-} |
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- |
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-EXPORT_FUNCTIONS src_prepare src_configure |
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