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commit: 51d123886275dc5e4a3b91fbac47600d4da7f196 |
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Author: David Seifert <soap <AT> gentoo <DOT> org> |
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AuthorDate: Mon Feb 6 20:48:02 2017 +0000 |
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Commit: David Seifert <soap <AT> gentoo <DOT> org> |
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CommitDate: Mon Feb 6 21:26:41 2017 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=51d12388 |
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|
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sci-biology/maq: Remove old |
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|
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Package-Manager: Portage-2.3.3, Repoman-2.3.1 |
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Closes: https://github.com/gentoo/gentoo/pull/3856 |
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|
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sci-biology/maq/maq-0.7.1-r1.ebuild | 40 ------------------------------------- |
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sci-biology/maq/maq-0.7.1.ebuild | 24 ---------------------- |
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2 files changed, 64 deletions(-) |
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|
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diff --git a/sci-biology/maq/maq-0.7.1-r1.ebuild b/sci-biology/maq/maq-0.7.1-r1.ebuild |
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deleted file mode 100644 |
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index 1fd699b..00000000 |
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--- a/sci-biology/maq/maq-0.7.1-r1.ebuild |
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+++ /dev/null |
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@@ -1,40 +0,0 @@ |
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-# Copyright 1999-2017 Gentoo Foundation |
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-# Distributed under the terms of the GNU General Public License v2 |
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-# $Id$ |
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- |
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-EAPI=4 |
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- |
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-inherit autotools eutils |
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- |
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-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes" |
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-HOMEPAGE="http://maq.sourceforge.net/" |
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-SRC_URI=" |
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- mirror://sourceforge/${PN}/${P}.tar.bz2 |
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- mirror://sourceforge/${PN}/calib-36.dat.gz" |
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- |
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-LICENSE="GPL-3" |
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-SLOT="0" |
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-IUSE="" |
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-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" |
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- |
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-RDEPEND="sys-libs/zlib" |
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-DEPEND="${RDEPEND}" |
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- |
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-src_prepare() { |
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- epatch \ |
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- "${FILESDIR}"/${P}-flags.patch \ |
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- "${FILESDIR}"/${P}-bfr-overfl.patch \ |
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- "${FILESDIR}"/${P}-gcc-4.7.patch |
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- sed \ |
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- -e '/ext_CFLAGS/s:-m64::g' \ |
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- -i configure* || die |
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- eautoreconf |
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-} |
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- |
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-src_install() { |
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- default |
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- insinto /usr/share/maq |
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- doins "${WORKDIR}"/*.dat |
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- doman maq.1 |
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- dodoc ${PN}.pdf |
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-} |
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|
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diff --git a/sci-biology/maq/maq-0.7.1.ebuild b/sci-biology/maq/maq-0.7.1.ebuild |
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deleted file mode 100644 |
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index 1f8df1f..00000000 |
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--- a/sci-biology/maq/maq-0.7.1.ebuild |
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+++ /dev/null |
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@@ -1,24 +0,0 @@ |
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-# Copyright 1999-2017 Gentoo Foundation |
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-# Distributed under the terms of the GNU General Public License v2 |
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-# $Id$ |
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- |
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-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes" |
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-HOMEPAGE="http://maq.sourceforge.net/" |
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-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.bz2 |
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- mirror://sourceforge/${PN}/calib-36.dat.gz" |
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- |
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-LICENSE="GPL-3" |
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-SLOT="0" |
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-IUSE="" |
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-KEYWORDS="amd64 x86" |
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- |
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-DEPEND="" |
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-RDEPEND="" |
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- |
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-src_install() { |
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- emake DESTDIR="${D}" install || die |
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- insinto /usr/share/maq |
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- doins "${WORKDIR}"/*.dat || die |
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- doman maq.1 |
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- dodoc AUTHORS ChangeLog NEWS maq.pdf |
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-} |