Archives
Archives
| From: | "Andrey Kislyuk (weaver)" <weaver@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/plink: plink-1.07.ebuild ChangeLog |
| Date: | Wed, 27 Jan 2010 15:50:12 |
| Message-Id: | E1NaA9h-0000An-L4@stork.gentoo.org |
| 1 | weaver 10/01/27 15:50:09 |
| 2 | |
| 3 | Modified: ChangeLog |
| 4 | Added: plink-1.07.ebuild |
| 5 | Log: |
| 6 | Version bump |
| 7 | (Portage version: 2.2_rc30/cvs/Linux x86_64) |
| 8 | |
| 9 | Revision Changes Path |
| 10 | 1.5 sci-biology/plink/ChangeLog |
| 11 | |
| 12 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?rev=1.5&view=markup |
| 13 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?rev=1.5&content-type=text/plain |
| 14 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?r1=1.4&r2=1.5 |
| 15 | |
| 16 | Index: ChangeLog |
| 17 | =================================================================== |
| 18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v |
| 19 | retrieving revision 1.4 |
| 20 | retrieving revision 1.5 |
| 21 | diff -u -r1.4 -r1.5 |
| 22 | --- ChangeLog 5 Aug 2009 21:16:10 -0000 1.4 |
| 23 | +++ ChangeLog 27 Jan 2010 15:50:09 -0000 1.5 |
| 24 | @@ -1,6 +1,11 @@ |
| 25 | # ChangeLog for sci-biology/plink |
| 26 | -# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 |
| 27 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v 1.4 2009/08/05 21:16:10 maekke Exp $ |
| 28 | +# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
| 29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v 1.5 2010/01/27 15:50:09 weaver Exp $ |
| 30 | + |
| 31 | +*plink-1.07 (27 Jan 2010) |
| 32 | + |
| 33 | + 27 Jan 2010; Andrey Kislyuk <weaver@g.o> +plink-1.07.ebuild: |
| 34 | + Version bump |
| 35 | |
| 36 | 05 Aug 2009; Markus Meier <maekke@g.o> plink-1.06.ebuild: |
| 37 | x86 stable, bug #279345 |
| 38 | |
| 39 | |
| 40 | |
| 41 | 1.1 sci-biology/plink/plink-1.07.ebuild |
| 42 | |
| 43 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/plink-1.07.ebuild?rev=1.1&view=markup |
| 44 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/plink-1.07.ebuild?rev=1.1&content-type=text/plain |
| 45 | |
| 46 | Index: plink-1.07.ebuild |
| 47 | =================================================================== |
| 48 | # Copyright 1999-2010 Gentoo Foundation |
| 49 | # Distributed under the terms of the GNU General Public License v2 |
| 50 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/plink-1.07.ebuild,v 1.1 2010/01/27 15:50:09 weaver Exp $ |
| 51 | |
| 52 | EAPI="2" |
| 53 | |
| 54 | DESCRIPTION="Whole genome association analysis toolset" |
| 55 | HOMEPAGE="http://pngu.mgh.harvard.edu/~purcell/plink/" |
| 56 | SRC_URI="http://pngu.mgh.harvard.edu/~purcell/plink/dist/${P}-src.zip" |
| 57 | |
| 58 | LICENSE="GPL-2" |
| 59 | SLOT="0" |
| 60 | IUSE="-webcheck" |
| 61 | KEYWORDS="~amd64 ~x86" |
| 62 | |
| 63 | DEPEND="app-arch/unzip" |
| 64 | RDEPEND="" |
| 65 | |
| 66 | S="${WORKDIR}/${P}-src" |
| 67 | |
| 68 | # Package collides with net-misc/putty. Renamed to p-link following discussion with Debian. |
| 69 | # Package contains bytecode-only jar gPLINK.jar. Ignored, notified upstream. |
| 70 | |
| 71 | src_prepare() { |
| 72 | sed -i -e '/CXXFLAGS =/ s/^/#/' -e 's/-static//' "${S}/Makefile" || die |
| 73 | use webcheck || sed -i '/WITH_WEBCHECK =/ s/^/#/' "${S}/Makefile" || die |
| 74 | } |
| 75 | |
| 76 | src_install() { |
| 77 | newbin plink p-link || die |
| 78 | dodoc README.txt |
| 79 | } |