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markusle 08/04/20 11:11:21 |
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|
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Modified: ChangeLog paml-4a.ebuild |
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Added: paml-4b.ebuild |
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Log: |
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Version bump (fixes bug #218232). |
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(Portage version: 2.1.5_rc3) |
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|
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Revision Changes Path |
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1.3 sci-biology/paml/ChangeLog |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/ChangeLog?rev=1.3&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/ChangeLog?rev=1.3&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/ChangeLog?r1=1.2&r2=1.3 |
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/paml/ChangeLog,v |
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retrieving revision 1.2 |
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retrieving revision 1.3 |
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diff -u -r1.2 -r1.3 |
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--- ChangeLog 22 Nov 2007 13:26:59 -0000 1.2 |
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+++ ChangeLog 20 Apr 2008 11:11:20 -0000 1.3 |
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@@ -1,6 +1,11 @@ |
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# ChangeLog for sci-biology/paml |
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-# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/paml/ChangeLog,v 1.2 2007/11/22 13:26:59 markusle Exp $ |
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+# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/paml/ChangeLog,v 1.3 2008/04/20 11:11:20 markusle Exp $ |
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+ |
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+*paml-4b (20 Apr 2008) |
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+ |
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+ 20 Apr 2008; Markus Dittrich <markusle@g.o> +paml-4b.ebuild: |
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+ Version bump (fixes bug #218232). |
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|
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*paml-4a (22 Nov 2007) |
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|
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|
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1.2 sci-biology/paml/paml-4a.ebuild |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/paml-4a.ebuild?rev=1.2&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/paml-4a.ebuild?rev=1.2&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/paml-4a.ebuild?r1=1.1&r2=1.2 |
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|
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Index: paml-4a.ebuild |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/paml/paml-4a.ebuild,v |
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retrieving revision 1.1 |
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retrieving revision 1.2 |
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diff -u -r1.1 -r1.2 |
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--- paml-4a.ebuild 22 Nov 2007 13:26:59 -0000 1.1 |
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+++ paml-4a.ebuild 20 Apr 2008 11:11:20 -0000 1.2 |
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@@ -1,6 +1,6 @@ |
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-# Copyright 1999-2007 Gentoo Foundation |
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+# Copyright 1999-2008 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/paml/paml-4a.ebuild,v 1.1 2007/11/22 13:26:59 markusle Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/paml/paml-4a.ebuild,v 1.2 2008/04/20 11:11:20 markusle Exp $ |
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|
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inherit toolchain-funcs |
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1.1 sci-biology/paml/paml-4b.ebuild |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/paml-4b.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/paml/paml-4b.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: paml-4b.ebuild |
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=================================================================== |
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# Copyright 1999-2008 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/paml/paml-4b.ebuild,v 1.1 2008/04/20 11:11:20 markusle Exp $ |
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|
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inherit toolchain-funcs |
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|
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MY_PV="${PV:0:1}" |
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MY_P="${PN}${MY_PV}" |
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DESCRIPTION="Phylogenetic Analysis by Maximum Likelihood" |
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HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html" |
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SRC_URI="http://abacus.gene.ucl.ac.uk/software/${PN}${PV}.tar.gz" |
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LICENSE="free-noncomm" |
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SLOT="0" |
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KEYWORDS="~x86 ~amd64" |
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IUSE="" |
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RDEPEND="" |
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DEPEND="${RDEPEND}" |
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S="${WORKDIR}/${MY_P}" |
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|
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src_compile() { |
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cd src |
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emake \ |
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-f Makefile.UNIX \ |
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CC="$(tc-getCC)" \ |
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CFLAGS="${CFLAGS}" \ |
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|| die "make failed" |
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} |
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|
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src_install() { |
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pushd "${S}"/src |
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dobin baseml codeml basemlg mcmctree pamp evolver yn00 chi2 |
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popd |
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dodoc README.txt doc/* |
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insinto /usr/share/${PN}/control |
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doins *.ctl || die "Failed to install control files" |
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insinto /usr/share/${PN}/dat |
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doins stewart* *.dat dat/* || die "Failed to install data files" |
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insinto /usr/share/${PN} |
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doins -r examples/ || die "Failed to install examples" |
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} |
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-- |
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