From: | Horea Christian <horea.christ@×××××.com> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] proj/sci:master commit in: sci-biology/exomiser-bin/ |
Date: | Sun, 27 Sep 2020 21:24:35 |
Message-Id: | 1601240616.e2f2334b11f6a99c17b945ccdbcdc3f029879db1.chymera@gentoo |
1 | commit: e2f2334b11f6a99c17b945ccdbcdc3f029879db1 |
2 | Author: Horea Christian <chr <AT> chymera <DOT> eu> |
3 | AuthorDate: Sun Sep 27 21:03:36 2020 +0000 |
4 | Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> |
5 | CommitDate: Sun Sep 27 21:03:36 2020 +0000 |
6 | URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e2f2334b |
7 | |
8 | sci-biology/exomiser-bin: removed unmaintained package |
9 | |
10 | Package-Manager: Portage-3.0.8, Repoman-3.0.1 |
11 | Signed-off-by: Horea Christian <chr <AT> chymera.eu> |
12 | |
13 | sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild | 30 ---------------------- |
14 | sci-biology/exomiser-bin/metadata.xml | 12 --------- |
15 | 2 files changed, 42 deletions(-) |
16 | |
17 | diff --git a/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild b/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild |
18 | deleted file mode 100644 |
19 | index 87434fa8a..000000000 |
20 | --- a/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild |
21 | +++ /dev/null |
22 | @@ -1,30 +0,0 @@ |
23 | -# Copyright 1999-2016 Gentoo Foundation |
24 | -# Distributed under the terms of the GNU General Public License v2 |
25 | - |
26 | -EAPI=5 |
27 | - |
28 | -DESCRIPTION="Annotate VCF files and prioritize genome/exome mutations" |
29 | -HOMEPAGE="http://www.sanger.ac.uk/science/tools/exomiser" |
30 | -SRC_URI="ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/exomiser-cli-${PV}-distribution.zip |
31 | - ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/GenomiserREADME -> ${PN}.README |
32 | - ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/README.md -> ${PN}.README.md" |
33 | -# 1.16GB ! |
34 | - |
35 | -LICENSE="AGPL-3+" |
36 | -SLOT="0" |
37 | -KEYWORDS="" |
38 | -IUSE="" |
39 | - |
40 | -DEPEND="sci-biology/Jannovar-bin" |
41 | -RDEPEND="${DEPEND}" |
42 | - |
43 | -src_install(){ |
44 | - dodoc "${DISTDIR}"/${PN}.README "${DISTDIR}"/${PN}.README.md |
45 | -} |
46 | - |
47 | -pkg_postinst(){ |
48 | - einfo "Please download 3.7GB file from ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/h2_db_dumps/exomiser-${PV}.BETA.h2.db.gz" |
49 | - einfo "and follow README.md" |
50 | - einfo "The is also 19GB file ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/exomiser-cli-7.2.1-data.zip" |
51 | - einfo "with test data" |
52 | -} |
53 | |
54 | diff --git a/sci-biology/exomiser-bin/metadata.xml b/sci-biology/exomiser-bin/metadata.xml |
55 | deleted file mode 100644 |
56 | index 138cb7705..000000000 |
57 | --- a/sci-biology/exomiser-bin/metadata.xml |
58 | +++ /dev/null |
59 | @@ -1,12 +0,0 @@ |
60 | -<?xml version="1.0" encoding="UTF-8"?> |
61 | -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
62 | -<pkgmetadata> |
63 | - <maintainer type="person"> |
64 | - <email>mmokrejs@×××××××××××××××.cz</email> |
65 | - <name>Martin Mokrejs</name> |
66 | - </maintainer> |
67 | - <maintainer type="project"> |
68 | - <email>sci-biology@g.o</email> |
69 | - <name>Gentoo Biology Project</name> |
70 | - </maintainer> |
71 | -</pkgmetadata> |