[gentoo-desktop] problems with (Java) apps after upgrading some packages

[Daniel Manesku]

Hi folks!

A few days ago, I updated sun-jdk-1.5.0.8 to sun-jdk-1.5.0.10. After
upgrading it (or maybe because of upgrading any other package form list
below)

# genlop -l --date 5 days ago
>  * app-admin/conky
>
>      Tue Jan 23 20:15:53 2007 >>> app-admin/conky-1.4.5
>      Tue Jan 23 20:19:57 2007 >>> sys-devel/automake-wrapper-3-r1
>      Tue Jan 23 20:25:01 2007 >>> sys-devel/automake-1.10
>      Tue Jan 23 20:31:35 2007 >>> media-libs/libao-0.8.6-r3
>      Tue Jan 23 20:35:18 2007 >>> media-libs/libmad-0.15.1b-r2
>      Tue Jan 23 20:40:21 2007 >>> media-libs/taglib-1.4-r1
>      Wed Jan 24 19:31:22 2007 >>> net-nds/openldap-2.3.30-r2
>      Thu Jan 25 01:51:28 2007 >>> dev-java/sun-jdk-1.5.0.10
>      Thu Jan 25 02:36:16 2007 >>> net-p2p/amule-2.1.3
>      Thu Jan 25 20:35:18 2007 >>> net-nds/openldap-2.3.33
>      Fri Jan 26 17:23:10 2007 >>> net-p2p/limewire-4.12.6-r1
>      Fri Jan 26 17:25:47 2007 >>> dev-java/java-config-1.3.7
>      Fri Jan 26 17:26:12 2007 >>> dev-java/java-config-2.0.31


java based applications stopped working:


daniel1988@gentoo ~ $ limewire
> /usr/bin/java: line 21: /usr/lib/jvm/blackdown-jdk-1.4.2/bin/java:
> Permission denied
> /usr/bin/java: line 21: /usr/lib/jvm/blackdown-jdk-1.4.2/bin/java:
> Success


daniel1988@gentoo ~ $ azureus
> You have gentoo.config files in both
> /home/daniel1988/.azureus and
> /home/daniel1988/.Azureus
> /home/daniel1988/.Azureus is deprecated and you can delete this directory.
>
>
> using /home/daniel1988/.azureus/gentoo.config
> ${UI_OPTIONS} is no longer supported. ${UI} should be used instead instead
>
> Unsetting ${UI_OPTIONS}
> /usr/bin/java: line 21: /usr/lib/jvm/blackdown-jdk-1.4.2/bin/java:
> Permission denied
> /usr/bin/java: line 21: /usr/lib/jvm/blackdown-jdk-1.4.2/bin/java: Success
>



daniel1988@gentoo /usr/lib/jvm/blackdown-jdk-1.4.2/bin $ ls -lah | grep java
>
> -rwxrwxrwx 1 root root  65K Dec  5 00:22 java
> -rwxr-xr-x 1 root root 1.8K Dec  5 00:22 java-rmi.cgi
> -rwxr-xr-x 1 root root  65K Jan 26 17:29 java_bak
> -rwxr-xr-x 1 root root  67K Dec  5 00:22 javac
> -rwxr-xr-x 1 root root  67K Dec  5 00:22 javadoc
> -rwxr-xr-x 1 root root  67K Dec  5 00:22 javah
> -rwxr-xr-x 1 root root  67K Dec  5 00:22 javap
> lrwxrwxrwx 1 root root   17 Jan 25 01:45 javaws -> ../jre/bin/javaws


Because I had no space left on / , I moved /opt/blackdown* & /opt/sun-jdk*
to /data/opt/* & made proper links:

> daniel1988@gentoo /opt $ ls -lah
> total 11K
> drwxr-xr-x 11 root root 1.0K Jan 25 01:47 .
> drwxr-xr-x 20 root root 1.0K Feb 25  2006 ..
> -rw-r--r--  1 root root    0 Aug  7  2005 .keep
> drwxr-xr-x  4 root root 1.0K Jan 26 23:29 Acrobat7
> drwxr-xr-x  9 root root 1.0K Mar 28  2006 RealPlayer
> drwxr-xr-x  2 root root 1.0K Jan 26 23:29 bin
> lrwxrwxrwx  1 root root   33 Jan 25 01:47 blackdown-jdk-1.4.2.03 ->
> /data/opt/blackdown-jdk-1.4.2.03/
> lrwxrwxrwx  1 root root   33 Jan 25 01:47 blackdown-jre-1.4.2.03 ->
> /data/opt/blackdown-jre-1.4.2.03/
> drwxr-xr-x  3 root root 1.0K Feb 23  2006 libreadline-java
> drwxr-xr-x  2 root root 1.0K Jan 26 17:22 limewire
> drwxr-xr-x  3 root root 1.0K Jan  5  2006 netscape
> drwxr-xr-x  5 root root 1.0K Jan  3  2006 opera
> drwxr-xr-x  5 root root 1.0K Oct 28 16:34 rar
> lrwxrwxrwx  1 root root   27 Dec  7 12:57 sun-jdk-1.5.0.08 ->
> /data/opt/sun-jdk-1.5.0.08/
> drwxr-xr-x  8 root root 1.0K Jan 24 23:56 sun-jdk-1.5.0.10



Not related to java, but Evolution doesn't work as expected... most probably
because of some recent package upgrade (not java)
http://usera.imagecave.com/daniel1988/evolution.jpg

svn too:

> $ svn up
> svn: error while loading shared libraries: liblber-2.2.so.7: cannot open
> shared object file: No such file or directory



Any idea how to solve this?

P.S. configs from /etc are all updated. (etc-update for trivial changes &
after that dispatch-conf) < maybe some config messed things right here... :
|

Cheers,
Daniel