Re: [gentoo-science] problems compiling freemat from science overlay

[Pablo De Napoli]

I seems that the patches are not really needed, as I could sucessfully compile
freemat-3.2 by hand (configure/make/make install).
I don't know why the ebuild fails.

Pablo De Nápoli

--- Carmelo Piccione <carmelo.piccione@×××××.com> wrote:

> I think I addressed this exact issue in a previous thread. See this:
>
> http://www.mail-archive.com/gentoo-science@l.g.o/msg00497.html
>
> - Carmelo
>
> On 7/13/07, Pablo De Napoli <pdenapo@×××××.com> wrote:
> >
> > Hi
> >
> > I'm having problems compiling sci-mathematics/freemat-3.2 from science
> > overlay.
> > (on a Gentoo/x86 host)
> >
> > My error mesages are reported below:
> >
> > I'm using
> >
> > gcc-4.1.2
> > binutils-2.17
> >
> > My USE flags (reported by emerge -p sci-mathematics/freemat) are
> >
> > USE="arpack fftw ncurses umfpack -ffcall"
> >
> > Any help is wellcome!
> >
> > best regards.
> > Pablo
> >
> > PD: I don't know where should I report the bugs in the science overlay
> > package. In list
> > list? In bugzilla?
> > In the gentoo science site? (which seems to be broken, gives "internal
> > server error")
> >
> > Here are the error messages
> >
> > Making all in src
> > make[1]: Entering directory
> > `/var/tmp/portage/sci-mathematics/freemat-3.2/work/FreeMat-3.2/src'
> > make  all-am
> > make[2]: Entering directory
> > `/var/tmp/portage/sci-mathematics/freemat-3.2/work/FreeMat-3.2/src'
> > i686-pc-linux-gnu-g++  -O3 -march=athlon -funroll-loops -pipe
> > -fomit-frame-pointer   -o
> > FreeMat  application.o FuncMode.o FuncTerminal.o MainApp.o main.o
> > DumbTerminal.o
> > Terminal.o   application.moc.o FuncMode.moc.o MainApp.moc.o Terminal.moc.o
> > DumbTerminal.moc.o FreeMat_qrc.o ..//libs/libCore/libCore.a
> > ..//libs/libFN/libFN.a
> > ..//libs/libGraphics/libGraphics.a ..//libs/libFreeMat/libFreeMat.a
> > ..//libs/libXP/libXP.a ..//libs/libMex/libMex.a  -L/usr/lib/qt4 -lQtOpenGL
> > -lGLU -lGL
> > -lQtGui -laudio -lXt -lpng -lSM -lICE -lXrender -lXrandr -lXfixes
> > -lXcursor -lfreetype
> > -lfontconfig -lXext -lX11 -lQtNetwork -lQtXml -lQtCore -lz -lm -lrt
> > -lpthread -ldl   -lz
> > -larpack -lfftw3 -lfftw3f -lumfpack -lamd -llapack -lblas
> > -lpcre  -lncurses
> > -L/usr/lib/gcc/i686-pc-linux-gnu/4.1.2
> > -L/usr/lib/gcc/i686-pc-linux-gnu/4.1.2/../../../../i686-pc-linux-gnu/lib
> > -L/usr/lib/gcc/i686-pc-linux-gnu/4.1.2/../../.. -lncurses -lgfortranbegin
> > -lgfortran -lm
> > -lgcc_s
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_ge_complex<float>(float, float, float, float)':
> > Sparse.cpp:(.text._Z14slo_ge_complexIfEjT_S0_S0_S0_[unsigned int
> > slo_ge_complex<float>(float, float, float, float)]+0x13): undefined
> > reference to `float
> > complex_abs<float>(float, float)'
> > Sparse.cpp:(.text._Z14slo_ge_complexIfEjT_S0_S0_S0_[unsigned int
> > slo_ge_complex<float>(float, float, float, float)]+0x2b): undefined
> > reference to `float
> > complex_abs<float>(float, float)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_le_complex<float>(float, float, float, float)':
> > Sparse.cpp:(.text._Z14slo_le_complexIfEjT_S0_S0_S0_[unsigned int
> > slo_le_complex<float>(float, float, float, float)]+0x13): undefined
> > reference to `float
> > complex_abs<float>(float, float)'
> > Sparse.cpp:(.text._Z14slo_le_complexIfEjT_S0_S0_S0_[unsigned int
> > slo_le_complex<float>(float, float, float, float)]+0x2b): undefined
> > reference to `float
> > complex_abs<float>(float, float)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_gt_complex<float>(float, float, float, float)':
> > Sparse.cpp:(.text._Z14slo_gt_complexIfEjT_S0_S0_S0_[unsigned int
> > slo_gt_complex<float>(float, float, float, float)]+0x13): undefined
> > reference to `float
> > complex_abs<float>(float, float)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o):Sparse.cpp:
> > (.text._Z14slo_gt_complexIfEjT_S0_S0_S0_[unsigned
> > int slo_gt_complex<float>(float, float, float, float)]+0x2b): more
> > undefined references
> > to `float complex_abs<float>(float, float)' follow
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_ge_complex<double>(double, double, double, double)':
> > Sparse.cpp:(.text._Z14slo_ge_complexIdEjT_S0_S0_S0_[unsigned int
> > slo_ge_complex<double>(double, double, double, double)]+0x23): undefined
> > reference to
> > `double complex_abs<double>(double, double)'
> > Sparse.cpp:(.text._Z14slo_ge_complexIdEjT_S0_S0_S0_[unsigned int
> > slo_ge_complex<double>(double, double, double, double)]+0x3b): undefined
> > reference to
> > `double complex_abs<double>(double, double)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_le_complex<double>(double, double, double, double)':
> > Sparse.cpp:(.text._Z14slo_le_complexIdEjT_S0_S0_S0_[unsigned int
> > slo_le_complex<double>(double, double, double, double)]+0x23): undefined
> > reference to
> > `double complex_abs<double>(double, double)'
> > Sparse.cpp:(.text._Z14slo_le_complexIdEjT_S0_S0_S0_[unsigned int
> > slo_le_complex<double>(double, double, double, double)]+0x3b): undefined
> > reference to
> > `double complex_abs<double>(double, double)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `unsigned int
> > slo_gt_complex<double>(double, double, double, double)':
> > Sparse.cpp:(.text._Z14slo_gt_complexIdEjT_S0_S0_S0_[unsigned int
> > slo_gt_complex<double>(double, double, double, double)]+0x23): undefined
> > reference to
> > `double complex_abs<double>(double, double)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o):Sparse.cpp:
> > (.text._Z14slo_gt_complexIdEjT_S0_S0_S0_[unsigned
> > int slo_gt_complex<double>(double, double, double, double)]+0x3b): more
> > undefined
> > references to `double complex_abs<double>(double, double)' follow
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `float**
> > SparseAbsFunctionComplex<float>(int, int, float const**)':
> > Sparse.cpp:(.text._Z24SparseAbsFunctionComplexIfEPPT_iiPPKS0_[float**
> > SparseAbsFunctionComplex<float>(int, int, float const**)]+0x17a):
> > undefined reference to
> > `float complex_abs<float>(float, float)'
> > ..//libs/libFreeMat/libFreeMat.a(Sparse.o): In function `double**
> > SparseAbsFunctionComplex<double>(int, int, double const**)':
> > Sparse.cpp:(.text._Z24SparseAbsFunctionComplexIdEPPT_iiPPKS0_[double**
> > SparseAbsFunctionComplex<double>(int, int, double const**)]+0x17a):
> > undefined reference
> > to `double complex_abs<double>(double, double)'
> > collect2: ld returned 1 exit status
> > make[2]: *** [FreeMat] Error 1
> > make[2]: Leaving directory
> > `/var/tmp/portage/sci-mathematics/freemat-3.2/work/FreeMat-3.2/src'
> > make[1]: *** [all] Error 2
> > make[1]: Leaving directory
> > `/var/tmp/portage/sci-mathematics/freemat-3.2/work/FreeMat-3.2/src'
> > make: *** [all-recursive] Error 1
> >
> >
> >
> >
> >
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>



 
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