Gentoo Archives: gentoo-science

From: Christopher Schwan <cschwan@××××××××××××××××××.de>
To: Marek Kaluba <mk224@××××××××××.pl>, gentoo-science@l.g.o
Subject: [gentoo-science] Re: AW: sage-on-gentoo
Date: Thu, 04 Mar 2010 18:26:44
Message-Id: 201003041926.05744.cschwan@students.uni-mainz.de
Hi Mark,

On Wednesday 03 March 2010 23:45:01 you wrote:
> Hi Chris > > As before I spared some unused cpu cycles to emerge --depclean all sage > dependences and emerged sage again. Everything went smooth but sage emerge > still freezes at > > >>> Install sage-4.3.3 into > >>> /var/tmp/portage/sci-mathematics/sage-4.3.3/image/ category > > sci-mathematics > make -j3 DESTDIR=/var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt > install echo "Experimental use only!" > Experimental use only! > if [ "/var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt" = "" ]; then > \ echo "Set DESTDIR"; \ > exit 1; \ > fi > mkdir -p /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt > mkdir -p /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt/sage > mkdir -p /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt/bin/ > cp -r --preserve=mode,links * > /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt/sage/ python > local/bin/sage-hardcode_sage_root /var/tmp/portage/sci- > mathematics/sage-4.3.3/image//opt/sage/sage "/var/tmp/portage/sci- > mathematics/sage-4.3.3/image//opt"/sage > cp /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt/sage/sage > /var/tmp/portage/sci- mathematics/sage-4.3.3/image//opt/bin/ > cd /var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt/bin/; ./sage -c > Setting permissions of DOT_SAGE directory so only you can read and write > it. > > > build log is the same -- no errors, just stop at this point. > I examined list of processes and found that gap is running at pts/4 > [although emerge sage is on pts/0?] > > Name, Username, PID, TTY, Niceness, Virtual Size, Memory, Shared Mem, > Command, gap, root, 3139,pts/4,19, 53564, 38376, 1472, > /usr/libexec/gap/gap -m 32m -l /usr/share/gap -r -b -p -T -o 9999G > /var/tmp/portage/sci- > mathematics/sage-4.3.3/image/opt/sage/data//extcode/gap/sage.g > > here is the list of all processes running on pts/0: > > Name, Username, PID, TTY, Niceness, CPU %, IO Read, IO Write, Virtual Size, > Memory, Shared Mem, Command, Window Title > sandbox, root, 1826, pts/0, 19, 0, 0, 0, 3840, 140, 456, > [sci-mathematics/sage-4.3.3] sandbox "/usr/lib64/portage/bin/ebuild.sh" > install , > ebuild.sh, root, 1827, pts/0, 19, 0, 0, 0, 25540, 2572, 1432, /bin/bash > /usr/lib64/portage/bin/ebuild.sh install , > ebuild.sh, root, 1860, pts/0, 19, 0, 0, 0, 25720, 2704, 880, /bin/bash > /usr/lib64/portage/bin/ebuild.sh install , > make, root, 2084, pts/0, 19, 0, 0, 0, 14272, 572, 864, make -j3 > DESTDIR=/var/tmp/portage/sci-mathematics/sage-4.3.3/image//opt install , > sh, root, 2472, pts/0, 19, 0, 0, 0, 23452, 552, 1320, /bin/sh -c cd > /var/tmp/portage/sci- mathematics/sage-4.3.3/image//opt/bin/; ./sage -c , > bash, root, 2473, pts/0, 19, 0, 0, 0, 23584, 564, 1364, bash ./sage -c , > bash, root, 2476, pts/0, 19, 0, 0, 0, 23584, 656, 1400, bash > /var/tmp/portage/sci- > mathematics/sage-4.3.3/image/opt/sage/local/bin/sage-sage -c , > python2.6, root, 2491, pts/0, 19, 0, 0, 0, 38900, 3000, 2600, > /usr/bin/python2.6 > /var/tmp/portage/sci-mathematics/sage-4.3.3/image/opt/sage/local/bin/sage- > cleaner , python2.6, root, 2492, pts/0, 19, 0, 0, 0, 276496, 19720, 8684, > /usr/bin/python2.6 > /var/tmp/portage/sci-mathematics/sage-4.3.3/image/opt/sage/local/bin/sage- > eval , bash, marek, 3482, pts/0, 0, 0, 0, 0, 20948, 4, 548, /bin/bash , > su, root, 4257, pts/0, 0, 0, 0, 0, 44820, 4, 560, su , > bash, root, 4263, pts/0, 0, 0, 0, 0, 20948, 4, 548, bash , > python2.6, root, 4270, pts/0, 19, 0, 0, 0, 175648, 84740, 1776, > /usr/bin/python2.6 /usr/bin/emerge sage > > best regards > > m
thank you for investigating yourself on this problem - so we should check if gap is running correctly on your pc. I dont know much about gap, but you could try to start gap manually and then to exit the program (type gap and inside gap "quit;" ). I will forward this mail to the science mailing list which will be the place to discuss problems regarding Sage-on-Gentoo (at least for a while). Cheers, Christopher