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Hello again! |
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|
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On Wed, 11 Aug 2010 18:03:25 +0200 |
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Christopher Schwan <cschwan@××××××××××××××××××.de> wrote: |
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|
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> Hi, |
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> |
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> I added the old version of linbox which links against lapack; please try this |
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> one (-r1). I dont think you need to remerge Sage, but if -r1 also fails, try |
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> remerging Sage. |
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> |
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> Also, please send me your emerge --info. |
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> |
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I've emerged linbox-1.1.6-r1 and started sage. |
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It gave me this message: |
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|
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########## Qoute begins ########## |
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/usr/lib64/python2.6/site-packages/sage/plot/all.py:22: RuntimeWarning: |
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numpy.dtype size changed, may indicate binary incompatibility from |
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complex_plot import |
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complex_plot /usr/lib64/python2.6/site-packages/sage/plot/all.py:22: |
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RuntimeWarning: numpy.flatiter size changed, may indicate binary |
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incompatibility from complex_plot import |
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complex_plot /usr/lib64/python2.6/site-packages/sage/plot/plot3d/implicit_plot3d.py:5: |
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RuntimeWarning: numpy.dtype size changed, may indicate binary |
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incompatibility from implicit_surface import |
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ImplicitSurface /usr/lib64/python2.6/site-packages/sage/plot/plot3d/implicit_plot3d.py:5: |
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RuntimeWarning: numpy.flatiter size changed, may indicate binary |
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incompatibility from implicit_surface import |
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ImplicitSurface /usr/lib64/python2.6/site-packages/sage/calculus/all.py:17: |
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RuntimeWarning: numpy.dtype size changed, may indicate binary |
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incompatibility from riemann import |
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Riemann_Map /usr/lib64/python2.6/site-packages/sage/calculus/all.py:17: |
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RuntimeWarning: numpy.flatiter size changed, may indicate binary |
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incompatibility from riemann import |
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Riemann_Map /usr/lib64/python2.6/site-packages/sage/calculus/all.py:19: |
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RuntimeWarning: numpy.dtype size changed, may indicate binary |
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incompatibility from interpolators import polygon_spline, |
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complex_cubic_spline /usr/lib64/python2.6/site-packages/sage/calculus/all.py:19: |
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RuntimeWarning: numpy.flatiter size changed, may indicate binary |
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incompatibility from interpolators import polygon_spline, |
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complex_cubic_spline /usr/lib64/python2.6/site-packages/sage/stats/hmm/all.py:8: |
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RuntimeWarning: numpy.dtype size changed, may indicate binary |
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incompatibility from hmm import |
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DiscreteHiddenMarkovModel /usr/lib64/python2.6/site-packages/sage/stats/hmm/all.py:8: |
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RuntimeWarning: numpy.flatiter size changed, may indicate binary |
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incompatibility from hmm import DiscreteHiddenMarkovModel |
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########### Qoute ends ########## |
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But Sage seems to be working. At least, "factorial()" function works |
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properly. |
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|
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And here is my 'emerge --info': |
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|
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Portage 2.1.8.3 (default/linux/amd64/10.0, gcc-4.4.4, glibc-2.11.2-r0, |
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2.6.34-gentoo x86_64) |
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================================================================= |
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System uname: |
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Linux-2.6.34-gentoo-x86_64-Mobile_AMD_Sempron-tm-_Processor_3800 |
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+-with-gentoo-2.0.1 Timestamp of tree: Tue, 06 Jul 2010 21:55:01 +0000 |
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distcc[1530] (dcc_set_trace_from_env) ERROR: failed to open |
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logfile /var/log/distccd.log: Permission denied [disabled] |
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app-shells/bash: 4.1_p7 dev-lang/python: 2.6.5-r99, 3.1.2-r3 |
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dev-util/cmake: 2.8.1-r2 sys-apps/baselayout: 2.0.1 |
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sys-apps/openrc: 0.6.1-r1 sys-apps/sandbox: 2.2 |
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sys-devel/autoconf: 2.65-r1 |
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sys-devel/automake: 1.8.5-r3, 1.9.6-r3, 1.10.3, 1.11.1 |
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sys-devel/binutils: 2.20.1-r1 |
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sys-devel/gcc: 4.4.4-r1 |
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sys-devel/gcc-config: 1.4.1 |
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sys-devel/libtool: 2.2.10 |
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virtual/os-headers: 2.6.34 |
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ACCEPT_KEYWORDS="amd64 x86 ~amd64 ~x86" |
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ACCEPT_LICENSE="* -@EULA PUEL skype-eula" |
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CBUILD="x86_64-pc-linux-gnu" |
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CFLAGS="-march=k8 -O2 -pipe" |
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CHOST="x86_64-pc-linux-gnu" |
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CONFIG_PROTECT="/etc /usr/share/X11/xkb" |
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CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" |
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CXXFLAGS="-march=k8 -O2 -pipe" |
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DISTDIR="/mnt/data/Install/GNU-LinuxSoft/distfiles/" |
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FEATURES="assume-digests distlocks fixpackages news parallel-fetch |
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protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans |
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userfetch" GENTOO_MIRRORS=" http://gentoo.kiev.ua/ftp/ |
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ftp://gentoo.kiev.ua/" LANG="ru_RU.UTF-8" LDFLAGS="-Wl,-O1" |
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LINGUAS="ru" |
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MAKEOPTS="-j3" |
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PKGDIR="/mnt/data/Install/GNU-LinuxSoft/binpkg/" |
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PORTAGE_CONFIGROOT="/" |
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PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times |
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--compress --force --whole-file --delete --stats --timeout=180 |
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--exclude=/distfiles --exclude=/local --exclude=/packages" |
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PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" |
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PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/sage-on-gentoo /usr/local/overlays" |
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SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="3dnow 3dnowext |
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64bit 7zip X a52 aac aalib acpi alsa amd64 amrnb amrwb apm arts ass atm |
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audiofile avahi bash-completion bcmath berkdb bzip2 cairo calendar cdb |
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cddb cdparanoia cdr cgi clamav cli cracklib crypt ctype curl |
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curlwrappers cxx dbm dbus dbx dga djvu dri dssi dts dvd dvdr dvdread |
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encode esd evo exif expat faac faad fastcgi fbcon fbcondecor festival |
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ffmpeg fftw firefox flac flatfile freetds ftp fuse gd gdbm geoip gif |
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gimp ginac git glut gmp gnuplot gnustep gnutls gsl hal hddtemp |
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htmlhandbook icc iconv icq idn imlib inifile innodb irc jabber jack |
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javascript jbig jikes jpeg jpeg2k kerberos krb4 lame laptop lash latex |
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ldap leim libcaca libnotify libsamplerate libwww lm_sensors lua lzo mad |
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maildir matroska matrox mcal mhash mikmod milter mime mmap mmx mmxext |
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mng modplug modules motiff mozilla mp3 mpeg mpi mplayer msn mudflap |
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mule multilib musepack musicbrainz mysql mysqli nas ncurses nforce2 nls |
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nptl nptlonly nsplugin nvidia ogg openal opencore-amr opengl openmp osc |
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pam pcntl pdf plotutils pmu png posix pppd prelude profile python |
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qt3support qt4 quicktime radius readline recode reflection rss rtc ruby |
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samba sasl sdl session sharedmem shorten simplexml skins slang slp |
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sndfile snmp soap sockets socks5 sox speex spell sqlite sqlite3 sse |
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sse2 ssl ssse3 startup-notification svg symlink sysfs syslog systray |
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sysvipc szip taglib tcl tcpd tetex theora threads tidy tiff timidity |
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truetype unicode usb vcd vhosts vorbis wavpack wddx webkit x264 xattr |
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xcb xcomposite xface xine xinerama xml xml-rpc xorg xosd xpm xsl xvid |
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zeroconf zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x |
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ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel |
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intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem |
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ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty |
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extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul |
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mulaw multi null plug rate route share shm softvol" |
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APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon |
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authn_dbm authn_default authn_file authz_dbm authz_default |
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authz_groupfile authz_host authz_owner authz_user autoindex cache dav |
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dav_fs dav_lock deflate dir disk_cache env expires ext_filter |
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file_cache filter headers include info log_config logio mem_cache mime |
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mime_magic negotiation rewrite setenvif speling status unique_id |
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userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard |
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mouse evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz |
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cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="ru" |
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RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia vesa fbdev |
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nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options |
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ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat |
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logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, |
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EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, |
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PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS |
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|
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Portage 2.1.8.3 (default/linux/amd64/10.0, gcc-4.4.4, glibc-2.11.2-r0, |
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2.6.35-gentoo x86_64) |
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================================================================= |
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System uname: |
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Linux-2.6.35-gentoo-x86_64-Mobile_AMD_Sempron-tm-_Processor_3800 |
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+-with-gentoo-2.0.1 Timestamp of tree: Tue, 10 Aug 2010 20:30:01 +0000 |
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distcc 3.1 x86_64-pc-linux-gnu [disabled] app-shells/bash: 4.1_p7 |
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dev-lang/python: 2.6.5-r99, 3.1.2-r4 dev-util/cmake: 2.8.1-r2 |
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sys-apps/baselayout: 2.0.1 |
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sys-apps/openrc: 0.6.1-r1 |
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sys-apps/sandbox: 2.2 |
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sys-devel/autoconf: 2.13, 2.65-r1 |
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sys-devel/automake: 1.8.5-r3, 1.9.6-r3, 1.10.3, 1.11.1 |
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sys-devel/binutils: 2.20.1-r1 |
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sys-devel/gcc: 4.4.4-r1 |
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sys-devel/gcc-config: 1.4.1 |
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sys-devel/libtool: 2.2.10 |
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virtual/os-headers: 2.6.34 |
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ACCEPT_KEYWORDS="amd64 x86 ~amd64 ~x86" |
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ACCEPT_LICENSE="* -@EULA PUEL skype-eula AdobeFlash-10.1" |
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CBUILD="x86_64-pc-linux-gnu" |
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CFLAGS="-march=k8 -O2 -pipe" |
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CHOST="x86_64-pc-linux-gnu" |
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CONFIG_PROTECT="/etc /usr/share/X11/xkb" |
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CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" |
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CXXFLAGS="-march=k8 -O2 -pipe" |
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DISTDIR="/mnt/data/Install/GNU-LinuxSoft/distfiles/" |
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FEATURES="assume-digests distlocks fixpackages news parallel-fetch |
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protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans |
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userfetch" |
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GENTOO_MIRRORS=" http://gentoo.kiev.ua/ftp/ |
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ftp://gentoo.kiev.ua/" |
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LANG="ru_RU.UTF-8" |
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LDFLAGS="-Wl,-O1-Wl,--as-needed" |
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LINGUAS="ru" |
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MAKEOPTS="-j3" |
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PKGDIR="/mnt/data/Install/GNU-LinuxSoft/binpkg/" |
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PORTAGE_CONFIGROOT="/" |
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PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times |
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--compress --force --whole-file --delete --stats --timeout=180 |
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--exclude=/distfiles --exclude=/local --exclude=/packages" |
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PORTAGE_TMPDIR="/var/tmp" |
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PORTDIR="/usr/portage" |
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PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/sage-on-gentoo /usr/local/overlays" |
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SYNC="rsync://rsync.gentoo.org/gentoo-portage" |
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USE="3dnow 3dnowext |
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64bit 7zip X a52 aac aalib acpi alsa amd64 amrnb amrwb apm arts ass atm |
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audiofile bash-completion bcmath berkdb bzip2 cairo calendar cdb cddb |
187 |
cdparanoia cdr cgi clamav cli cracklib crypt ctype curl curlwrappers |
188 |
cxx dbm dbus dbx dga djvu dri dssi dts dvd dvdr dvdread encode evo exif |
189 |
expat faac faad fastcgi fbcon fbcondecor festival ffmpeg fftw firefox |
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flac flatfile freetds ftp fuse gd gdbm geoip gif gimp ginac git glut |
191 |
gmp gnuplot gnustep gnutls gsl hal hddtemp htmlhandbook icc iconv icq |
192 |
idn imlib inifile innodb irc jabber jack javascript jbig jikes jpeg |
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jpeg2k krb4 lame laptop lash latex ldap leim libcaca libnotify |
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libsamplerate libwww lm_sensors lua lzo mad maildir matroska matrox |
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mcal mhash mikmod milter mime mmap mmx mmxext mng modplug modules |
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motiff mozilla mp3 mpeg mpi mplayer msn mudflap mule multilib musepack |
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musicbrainz mysql mysqli nas ncurses nforce2 nls nptl nptlonly nsplugin |
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nvidia ogg openal opencore-amr opengl openmp osc pam pcntl pdf |
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plotutils pmu png posix pppd prelude profile python qt3support qt4 |
200 |
quicktime radius readline recode reflection rss rtc ruby samba sasl sdl |
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session sharedmem shorten simplexml skins slang slp sndfile snmp soap |
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sockets socks5 sox speex spell sqlite sqlite3 sse sse2 ssl ssse3 |
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startup-notification svg symlink sysfs syslog systray sysvipc szip |
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taglib tcl tcpd tetex theora threads tidy tiff timidity truetype |
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unicode usb vcd vhosts vorbis wavpack wddx webkit x264 xattr xcb |
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xcomposite xface xine xinerama xml xml-rpc xorg xosd xpm xsl xvid |
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zeroconf zlib" |
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ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x |
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ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel |
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intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem |
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ymfpci" |
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ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty |
213 |
extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul |
214 |
mulaw multi null plug rate route share shm softvol" |
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APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon |
216 |
authn_dbm authn_default authn_file authz_dbm authz_default |
217 |
authz_groupfile authz_host authz_owner authz_user autoindex cache cgi |
218 |
cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter |
219 |
file_cache filter headers include info log_config logio mem_cache mime |
220 |
mime_magic negotiation rewrite setenvif speling status unique_id |
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userdir usertrack vhost_alias" |
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ELIBC="glibc" |
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INPUT_DEVICES="keyboard mouse evdev synaptics" |
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KERNEL="linux" |
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LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb |
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ncurses text" |
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LINGUAS="ru" |
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RUBY_TARGETS="ruby18" |
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USERLAND="GNU" |
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VIDEO_CARDS="vesa nouveau" |
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XTABLES_ADDONS="quota2 psd pknock lscan |
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length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit |
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sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" |
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Unset: |
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CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, |
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PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS |
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|
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|
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Regards, |
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Vladimir |
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----- |
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<v_2e@×××.net> |