Gentoo Archives: gentoo-science

From: "Schwan
To: Marek Kaluba <mk224@××××××××××.pl>
Cc: "gentoo-science@l.g.o" <gentoo-science@l.g.o>
Subject: [gentoo-science] AW: AW: sage-on-gentoo
Date: Tue, 23 Mar 2010 17:44:20
Message-Id: E4EE4AAAD8B22F4C89BD10D73F1393DB049F4110@e14mdb-02.zdv.Uni-Mainz.DE
1 Hi Marek,
2
3 thank you for your mail - I currently do not have an idea how to fix this, but I will forward this mail to the science mailing list and have a closer look at the problem later. The gentoo-science list is the list where you should send your questions in future, so that Francois can read them, too. You can find info on the list here: http://www.gentoo.org/main/en/lists.xml
4
5 Also please send us a list of versions of the following programs you have installed:
6
7 - dev-lang/python (also its USE-flags)
8 - dev-python/cython
9 - dev-python/mpmath
10
11 Cheers,
12
13 Christopher
14
15 ________________________________________
16 Von: Marek Kaluba [mk224@××××××××××.pl]
17 Gesendet: Dienstag, 23. März 2010 00:00
18 An: Schwan, Christopher
19 Betreff: Re: AW: sage-on-gentoo
20
21 Hi Chris
22
23 This time after version bump to 4.3.4 i got following error:
24 (attachment contains build log)
25
26
27 python `which cython` --embed-positions --directive cdivision=True -I/var/tmp/portage/sci-
28 mathematics/sage-4.3.4/work/sage-4.3.4/devel/sage-main -o
29 sage/libs/symmetrica/symmetrica.c sage/libs/symmetrica/symmetrica.pyx
30 sage/libs/symmetrica/symmetrica.pyx --> /var/tmp/portage/sci-
31 mathematics/sage-4.3.4/work/sage-4.3.4/local//lib64/python/site-
32 packages//sage/libs/symmetrica/symmetrica.pyx
33 python `which cython` --embed-positions --directive cdivision=True -I/var/tmp/portage/sci-
34 mathematics/sage-4.3.4/work/sage-4.3.4/devel/sage-main -o sage/libs/mpmath/utils.c
35 sage/libs/mpmath/utils.pyx
36 sage/libs/mpmath/utils.pyx --> /var/tmp/portage/sci-
37 mathematics/sage-4.3.4/work/sage-4.3.4/local//lib64/python/site-
38 packages//sage/libs/mpmath/utils.pyx
39 python `which cython` --embed-positions --directive cdivision=True -I/var/tmp/portage/sci-
40 mathematics/sage-4.3.4/work/sage-4.3.4/devel/sage-main -o sage/libs/mpmath/ext_impl.c
41 sage/libs/mpmath/ext_impl.pyx
42
43 Error converting Pyrex file to C:
44 ------------------------------------------------------------
45 ...
46 from sage.libs.gmp.all cimport mpz_t
47 ^
48 ------------------------------------------------------------
49
50 /var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4/devel/sage-
51 main/sage/libs/mpmath/ext_impl.pxd:1:36: Unrecognized character
52
53 Error converting Pyrex file to C:
54
55
56 Error running command, failed with status 256.
57 sage: There was an error installing modified sage library code.
58
59 ERROR installing SAGE
60
61 real 5m6.568s
62 user 4m32.119s
63 sys 0m16.169s
64 sage: An error occurred while installing sage-4.3.4
65 Please email sage-devel http://groups.google.com/group/sage-devel
66 explaining the problem and send the relevant part of
67 of /var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4/install.log. Describe your
68 computer, operating system, etc.
69 If you want to try to fix the problem yourself, *don't* just cd to
70 /var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4/spkg/build/sage-4.3.4 and type
71 'make check' or whatever is appropriate.
72 Instead, the following commands setup all environment variables
73 correctly and load a subshell for you to debug the error:
74 (cd '/var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4/spkg/build/sage-4.3.4' &&
75 '/var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4/sage' -sh)
76 When you are done debugging, you can type "exit" to leave the
77 subshell.
78 make: *** [installed/sage-4.3.4] Error 1
79
80 real 27m11.521s
81 user 21m43.418s
82 sys 1m59.049s
83 Error building Sage.
84 * ERROR: sci-mathematics/sage-4.3.4 failed:
85 * install failed
86 *
87 * Call stack:
88 * ebuild.sh, line 54: Called src_compile
89 * environment, line 4726: Called die
90 * The specific snippet of code:
91 * ./install || die "install failed";
92 *
93 * If you need support, post the output of 'emerge --info =sci-mathematics/sage-4.3.4',
94 * the complete build log and the output of 'emerge -pqv =sci-mathematics/sage-4.3.4'.
95 * This ebuild used the following eclasses from overlays:
96 * /var/lib/layman/sage-on-gentoo/eclass/sage.eclass
97 * This ebuild is from an overlay named 'sage-on-gentoo': '/var/lib/layman/sage-on-
98 gentoo/'
99 * The complete build log is located at '/var/tmp/portage/sci-
100 mathematics/sage-4.3.4/temp/build.log'.
101 * The ebuild environment file is located at '/var/tmp/portage/sci-
102 mathematics/sage-4.3.4/temp/environment'.
103 * S: '/var/tmp/portage/sci-mathematics/sage-4.3.4/work/sage-4.3.4'
104
105 best regards
106
107 mark