Gentoo Archives: gentoo-science

From: v_2e@×××.net
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] [sage-on-gentoo] Sage 7.3 crashes
Date: Wed, 12 Oct 2016 15:14:45
Message-Id: 20161012181119.7a6a7248838cd970401161a5@ukr.net
In Reply to: Re: [gentoo-science] [sage-on-gentoo] Sage 7.3 crashes by "François Bissey"
1 On Wed, 12 Oct 2016 07:36:16 +1300
2 François Bissey <frp.bissey@×××××.com> wrote:
3
4 > ldd
5 > -r /usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so
6 > and readelf
7 > -d /usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so
8 > output please.
9 >
10 ldd
11 -r /usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so
12
13 linux-vdso.so.1 (0x00007fffc89f3000)
14 liblinbox.so.0 => /usr/lib64/liblinbox.so.0 (0x00007fa93942a000)
15 libgivaro.so.0 => /usr/lib64/libgivaro.so.0 (0x00007fa9391cb000)
16 libgmp.so.10 => /usr/lib64/libgmp.so.10 (0x00007fa938f51000)
17 libstdc++.so.6 => /usr/lib/gcc/x86_64-pc-linux-gnu/5.4.0/libstdc++.so.6 (0x00007fa938b52000)
18 libpython2.7.so.1.0 => /usr/lib64/libpython2.7.so.1.0 (0x00007fa938771000)
19 libm.so.6 => /lib64/libm.so.6 (0x00007fa93846d000)
20 libgcc_s.so.1 => /usr/lib/gcc/x86_64-pc-linux-gnu/5.4.0/libgcc_s.so.1 (0x00007fa938256000)
21 libc.so.6 => /lib64/libc.so.6 (0x00007fa937ebe000)
22 libgmpxx.so.4 => /usr/lib64/libgmpxx.so.4 (0x00007fa937cb6000)
23 /lib64/ld-linux-x86-64.so.2 (0x000055f9329e7000)
24 libpthread.so.0 => /lib64/libpthread.so.0 (0x00007fa937a99000)
25 libdl.so.2 => /lib64/libdl.so.2 (0x00007fa937895000)
26 libutil.so.1 => /lib64/libutil.so.1 (0x00007fa937691000)
27 undefined symbol: cblas_dger (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
28 undefined symbol: cblas_strsm (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
29 undefined symbol: cblas_sgemm (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
30 undefined symbol: cblas_dgemm (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
31 undefined symbol: cblas_sgemv (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
32 undefined symbol: cblas_strmm (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
33 undefined symbol: cblas_dgemv (/usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so)
34
35
36 ======================
37
38 readelf -d /usr/lib64/python2.7/site-packages/sage/matrix/matrix_modn_dense_float.so
39
40 Dynamic section at offset 0x75a68 contains 32 entries:
41 Tag Type Name/Value
42 0x0000000000000001 (NEEDED) Shared library: [liblinbox.so.0]
43 0x0000000000000001 (NEEDED) Shared library: [libgivaro.so.0]
44 0x0000000000000001 (NEEDED) Shared library: [libgmp.so.10]
45 0x0000000000000001 (NEEDED) Shared library: [libstdc++.so.6]
46 0x0000000000000001 (NEEDED) Shared library: [libpython2.7.so.1.0]
47 0x0000000000000001 (NEEDED) Shared library: [libm.so.6]
48 0x0000000000000001 (NEEDED) Shared library: [libgcc_s.so.1]
49 0x0000000000000001 (NEEDED) Shared library: [libc.so.6]
50 0x000000000000000c (INIT) 0xe620
51 0x000000000000000d (FINI) 0x6cbb8
52 0x0000000000000019 (INIT_ARRAY) 0x275950
53 0x000000000000001b (INIT_ARRAYSZ) 16 (bytes)
54 0x000000000000001a (FINI_ARRAY) 0x275960
55 0x000000000000001c (FINI_ARRAYSZ) 8 (bytes)
56 0x0000000000000004 (HASH) 0x1c8
57 0x000000006ffffef5 (GNU_HASH) 0x10d0
58 0x0000000000000005 (STRTAB) 0x4198
59 0x0000000000000006 (SYMTAB) 0x1ab0
60 0x000000000000000a (STRSZ) 22135 (bytes)
61 0x000000000000000b (SYMENT) 24 (bytes)
62 0x0000000000000003 (PLTGOT) 0x275fe8
63 0x0000000000000002 (PLTRELSZ) 6696 (bytes)
64 0x0000000000000014 (PLTREL) RELA
65 0x0000000000000017 (JMPREL) 0xcbf8
66 0x0000000000000007 (RELA) 0x9c70
67 0x0000000000000008 (RELASZ) 12168 (bytes)
68 0x0000000000000009 (RELAENT) 24 (bytes)
69 0x000000006ffffffe (VERNEED) 0x9b50
70 0x000000006fffffff (VERNEEDNUM) 4
71 0x000000006ffffff0 (VERSYM) 0x9810
72 0x000000006ffffff9 (RELACOUNT) 383
73 0x0000000000000000 (NULL) 0x0
74
75 ====================
76
77 Vladimir
78
79 -----
80 <v_2e@×××.net>

Replies

Subject Author
Re: [gentoo-science] [sage-on-gentoo] Sage 7.3 crashes "François Bissey" <frp.bissey@×××××.com>