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On 20/11/16 01:47, Zhu Sha Zang wrote: |
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> Hello everybody... |
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> |
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> |
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> A single doubt here: |
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> |
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> |
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> After an upgrade in package dev-libs/icu (from 57.1 to 58.1-r1) i tried |
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> a package upgrade inside R and got that: |
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> |
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> |
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> /> update.packages(checkBuilt=TRUE, ask=FALSE, |
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> repos='http://cran.us.r-project.org') |
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> trying URL 'http://cran.us.r-project.org/src/contrib/knitr_1.15.tar.gz' |
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> Content type 'application/x-gzip' length 1027358 bytes (1003 KB) |
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> ================================================== |
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> downloaded 1003 KB |
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> |
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> * installing *source* package ‘knitr’ ... |
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> ** package ‘knitr’ successfully unpacked and MD5 sums checked |
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> ** R |
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> ** demo |
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> ** inst |
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> ** preparing package for lazy loading |
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> Error in dyn.load(file, DLLpath = DLLpath, ...) : |
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> *unable to load shared object |
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> '/usr/lib64/R/library/stringi/libs/stringi.so':** |
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> ** libicui18n.so.57: cannot open shared object file: No such file or |
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> directory* |
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> Error : unable to load R code in package ‘knitr’ |
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> ERROR: lazy loading failed for package ‘knitr’ |
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> * removing ‘/usr/lib64/R/library/knitr’ |
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> * restoring previous ‘/usr/lib64/R/library/knitr’ |
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> |
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> The downloaded source packages are in |
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> ‘/tmp/RtmpKBphr0/downloaded_packages’ |
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> Updating HTML index of packages in '.Library' |
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> Making 'packages.html' ... done |
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> Warning message: |
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> In install.packages(update[instlib == l, "Package"], l, contriburl = |
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> contriburl, : |
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> installation of package ‘knitr’ had non-zero exit status |
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> / |
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> |
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> |
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> This kind of "bug" can I put inside bugs.gentoo.org or its a cran |
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> package bug? |
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> |
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> It is not the first time and i'm in dout about how to proceed. |
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> |
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> |
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> Thanks anyway. |
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> |
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> Best regards!! |
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> |
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> // |
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> |
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Due to the dev-libs/icu upgrade, the package that provides |
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/usr/lib64/R/library/stringi/libs/stringi.so needs to be rebuilt. I |
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assume you're using the R overlay, so that would be sci-CRAN/stringi. |
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It's possible for this rebuild to be achieved automatically in the |
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future, but it requires a minor modification to the stringi ebuild |
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(subslot operator to be added to dev-libs/icu dependency). As the R |
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overlay is automatically generated I'm not sure how to achieve this so |
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I've CCed Benda who I hope is the right person to look at this. :-) |
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