Gentoo Archives: gentoo-user

From: gevisz <gevisz@×××××.com>
To: gentoo-user@l.g.o
Subject: Re: [gentoo-user] Re: sci-libs/spqr-1.2.3-r1 failed to emerge
Date: Wed, 08 Apr 2020 11:45:41
Message-Id: CA+t6X7ecFMtp+7_S_TRW50LqcyyuEUR4X31f489KmN2ZOoTotw@mail.gmail.com
In Reply to: Re: [gentoo-user] Re: sci-libs/spqr-1.2.3-r1 failed to emerge by gevisz
1 ср, 8 апр. 2020 г. в 17:19, gevisz <gevisz@×××××.com>:
2 >
3 > ср, 8 апр. 2020 г. в 13:29, Nuno Silva <nunojsilva@×××××××.pt>:
4 > >
5 > > On 2020-04-08, gevisz wrote:
6 > >
7 > > > I've tried to install julia-1.4.0 but one of its dependencies, namely,
8 > > > sci-libs/spqr-1.2.3-r1 failed to emerge with the following error message:
9 > > >
10 > > > * Failed Running automake !
11 > > > *
12 > > > * Include in your bugreport the contents of:
13 > > > *
14 > > > * /var/tmp/portage/sci-libs/spqr-1.2.3-r1/temp/automake.out
15 > > [...]
16 > > > I tried to look into the automake.out file mentioned above but it even
17 > > > does not exists (or empty).
18 > >
19 > >
20 > >
21 > > Could this be bug 586582? (But that one has an automake.out?)
22 > >
23 > > https://bugs.gentoo.org/show_bug.cgi?id=586582
24 > >
25 > > And see also: https://bugs.gentoo.org/show_bug.cgi?id=627094
26 > >
27 > > From a quick read, it looks like there is no fix for 1.2.3-r1, but that
28 > > the plan is to drop 1.2.3-r1 if 2.0.9 works.
29 > >
30 > Yes, unmasking
31 > =sci-libs/spqr-2.0.9
32 > which lead to unmasking
33 > =sci-libs/cholmod-3.0.13
34 > =sci-libs/amd-2.4.6
35 > =sci-libs/colamd-2.9.6
36 > =sci-libs/camd-2.4.6
37 > =sci-libs/ccolamd-2.9.6
38 > =sci-libs/suitesparseconfig-5.4.0
39 > =sci-libs/metis-5.1.0-r2
40 > allowed emerging spqr-2.0.9.
41
42 Anyway, it did not helped to emerge julia because of the following:
43
44 # emerge julia
45
46 These are the packages that would be merged, in order:
47
48 Calculating dependencies... done!
49 [ebuild UD ] sci-libs/cholmod-2.1.2 [3.0.13] USE="-lapack* -metis%
50 -minimal%"
51 [ebuild N ] sci-libs/umfpack-5.6.2 USE="cholmod -doc -static-libs"
52 [ebuild N ~] dev-lang/julia-1.4.0-r1
53
54 !!! Multiple package instances within a single package slot have been pulled
55 !!! into the dependency graph, resulting in a slot conflict:
56
57 sci-libs/cholmod:0
58
59 (sci-libs/cholmod-3.0.13:0/0::gentoo, installed) USE="lapack
60 matrixops modify partition -cuda -doc -static-libs" ABI_X86="(64)"
61 pulled in by
62 >=sci-libs/cholmod-2[lapack,partition?] required by
63 (sci-libs/spqr-2.0.9:0/0::gentoo, installed) USE="-doc -partition
64 -static-libs -tbb" ABI_X86="(64)"
65 ^^^^^^^^^^
66
67 (sci-libs/cholmod-2.1.2:0/0::gentoo, ebuild scheduled for merge)
68 USE="(-cuda) -doc -lapack -metis -minimal -static-libs" ABI_X86="(64)"
69 pulled in by
70 >=sci-libs/cholmod-2[-minimal] required by
71 (sci-libs/umfpack-5.6.2:0/0::gentoo, ebuild scheduled for merge)
72 USE="cholmod -doc -static-libs" ABI_X86="(64)"
73 ^^^^^^^^
74
75
76 It may be possible to solve this problem by using package.mask to
77 prevent one of those packages from being selected. However, it is also
78 possible that conflicting dependencies exist such that they are
79 impossible to satisfy simultaneously. If such a conflict exists in
80 the dependencies of two different packages, then those packages can
81 not be installed simultaneously. You may want to try a larger value of
82 the --backtrack option, such as --backtrack=30, in order to see if
83 that will solve this conflict automatically.
84
85 For more information, see MASKED PACKAGES section in the emerge man
86 page or refer to the Gentoo Handbook.

Replies

Subject Author
Re: [gentoo-user] Re: sci-libs/spqr-1.2.3-r1 failed to emerge Neil Bothwick <neil@××××××××××.uk>