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Hello, |
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|
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I recently removed some packages like blas-reference, cblas-reference, |
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and lapack-reference to get emerge to run (some blocking issues). |
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Not sure that was a good idea because now, even if I've reinstalled |
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these packages, |
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I am having several new problems: |
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|
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- compiling gcc with the gsl library spits out errors like: |
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g++ -L/usr/local/lib -lm -lgsl exact.o |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_ctrmv' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_zswap' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_zsymm' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_cgeru' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_sgemm' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_ctrsv' |
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/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64/libgsl.so: |
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undefined reference to `cblas_sgemv' |
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and so on....... |
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|
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- still can't re-emerge packages like gsl and gmsh. For example, for gmsh I get; |
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..... |
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[100%] Building CXX object |
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CMakeFiles/gmsh.dir/contrib/bamg/bamglib/MeshDraw.cpp.o |
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[100%] Building CXX object |
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CMakeFiles/gmsh.dir/contrib/bamg/bamglib/MeshQuad.cpp.o |
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[100%] Building CXX object |
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CMakeFiles/gmsh.dir/contrib/bamg/bamglib/MeshWrite.cpp.o |
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[100%] Building CXX object CMakeFiles/gmsh.dir/contrib/bamg/bamglib/Meshio.cpp.o |
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[100%] Building CXX object |
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CMakeFiles/gmsh.dir/contrib/bamg/bamglib/QuadTree.cpp.o |
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make[2]: *** No rule to make target `/usr/lib64/libcblas.so', needed |
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by `gmsh'. Stop. |
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make[2]: *** Waiting for unfinished jobs.... |
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[100%] Building CXX object |
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CMakeFiles/gmsh.dir/contrib/bamg/bamglib/SetOfE4.cpp.o |
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make[1]: *** [CMakeFiles/gmsh.dir/all] Error 2 |
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make: *** [all] Error 2 |
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emake failed |
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* ERROR: sci-libs/gmsh-2.5.0 failed (compile phase): |
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* Make failed! |
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* |
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* Call stack: |
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* ebuild.sh, line 56: Called src_compile |
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* environment, line 2995: Called cmake-utils_src_compile |
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* environment, line 866: Called _execute_optionaly 'src_compile' |
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* environment, line 291: Called enable_cmake-utils_src_compile |
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* environment, line 1105: Called cmake-utils_src_make |
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* environment, line 885: Called die |
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* The specific snippet of code: |
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* emake "$@" || die "Make failed!"; |
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* |
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* If you need support, post the output of 'emerge --info =sci-libs/gmsh-2.5.0', |
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* the complete build log and the output of 'emerge -pqv =sci-libs/gmsh-2.5.0'. |
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* This ebuild is from an overlay named 'science': '/var/lib/layman/science/' |
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* The complete build log is located at |
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'/var/tmp/portage/sci-libs/gmsh-2.5.0/temp/build.log'. |
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* The ebuild environment file is located at |
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'/var/tmp/portage/sci-libs/gmsh-2.5.0/temp/environment'. |
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* S: '/var/tmp/portage/sci-libs/gmsh-2.5.0/work/gmsh-2.5.0-source' |
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|
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>>> Failed to emerge sci-libs/gmsh-2.5.0, Log file: |
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|
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>>> '/var/tmp/portage/sci-libs/gmsh-2.5.0/temp/build.log' |
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|
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|
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/usr/lib64/libcblas.so is present: |
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|
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|
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Does anyone have an idea of how solve this problem? |
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|
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I'd be glad to provide more details. |
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|
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Thanks |
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|
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Denis |
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