Gentoo Archives: gentoo-user

From: Marco Calviani <marco.calviani@×××××.com>
To: gentoo-user@l.g.o
Subject: [gentoo-user] MPICH2 and errors....
Date: Mon, 25 Dec 2006 20:02:37
Message-Id: da5cd1900612251157n4c740c8bve3b8f63a02b30174@mail.gmail.com
1 Hi list,
2 i'm compiling a program that uses the MPICH2-provided libraries.
3 However during installation i'm getting the following error:
4
5 /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libmpich.so:
6 undefined reference to `aio_read64'
7 /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libmpich.so:
8 undefined reference to `aio_error64'
9 /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libmpich.so:
10 undefined reference to `aio_suspend64'
11 /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libmpich.so:
12 undefined reference to `aio_write64'
13 /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libmpich.so:
14 undefined reference to `aio_return64'
15
16
17 I'm asking myself if this error is due to some errors i've done during
18 the mpich2 installation or it is a problem located upstream (that is
19 on the program i'm trying to compiler. Please note i'm running on a
20 x86_64 machine with gcc-4.1.1.
21
22 Portage 2.1.1-r2 (default-linux/amd64/2006.1, gcc-4.1.1, glibc-2.4-r4,
23 2.6.18-gentoo-r2 x86_64)
24 =================================================================
25 System uname: 2.6.18-gentoo-r2 x86_64 Intel(R) Pentium(R) D CPU 3.20GHz
26 Gentoo Base System version 1.12.6
27 Last Sync: Mon, 25 Dec 2006 19:30:01 +0000
28 ccache version 2.3 [enabled]
29 app-admin/eselect-compiler: [Not Present]
30 dev-java/java-config: 1.3.7, 2.0.30
31 dev-lang/python: 2.4.3-r4
32 dev-python/pycrypto: 2.0.1-r5
33 dev-util/ccache: 2.3
34 dev-util/confcache: [Not Present]
35 sys-apps/sandbox: 1.2.17
36 sys-devel/autoconf: 2.13, 2.60
37 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
38 sys-devel/binutils: 2.16.1-r3
39 sys-devel/gcc-config: 1.3.14
40 sys-devel/libtool: 1.5.22
41 virtual/os-headers: 2.6.11-r2
42 ACCEPT_KEYWORDS="amd64"
43 AUTOCLEAN="yes"
44 CBUILD="x86_64-pc-linux-gnu"
45 CFLAGS="-march=nocona -O2 -pipe"
46 CHOST="x86_64-pc-linux-gnu"
47 CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config
48 /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config"
49 CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf
50 /etc/java-config/vms/ /etc/revdep-rebuild /etc/terminfo
51 /etc/texmf/web2c"
52 CXXFLAGS="-march=nocona -O2 -pipe"
53 DISTDIR="/usr/portage/distfiles"
54 FEATURES="autoconfig ccache distlocks metadata-transfer sandbox sfperms strict"
55 GENTOO_MIRRORS="http://distfiles.gentoo.org
56 http://distro.ibiblio.org/pub/linux/distributions/gentoo"
57 MAKEOPTS="-j5"
58 PKGDIR="/usr/portage/packages"
59 PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times
60 --compress --force --whole-file --delete --delete-after --stats
61 --timeout=180 --exclude='/distfiles' --exclude='/local'
62 --exclude='/packages'"
63 PORTAGE_TMPDIR="/var/tmp"
64 PORTDIR="/usr/portage"
65 SYNC="rsync://rsync.gentoo.org/gentoo-portage"
66 USE="X Xaw3d acpi alsa alsa_cards_ali5451 alsa_cards_als4000
67 alsa_cards_atiixp alsa_cards_atiixp-modem alsa_cards_bt87x
68 alsa_cards_ca0106 alsa_cards_cmipci alsa_cards_emu10k1x
69 alsa_cards_ens1370 alsa_cards_ens1371 alsa_cards_es1938
70 alsa_cards_es1968 alsa_cards_fm801 alsa_cards_hda-intel
71 alsa_cards_intel8x0 alsa_cards_intel8x0m alsa_cards_maestro3
72 alsa_cards_trident alsa_cards_usb-audio alsa_cards_via82xx
73 alsa_cards_via82xx-modem alsa_cards_ymfpci alsa_pcm_plugins_adpcm
74 alsa_pcm_plugins_alaw alsa_pcm_plugins_asym alsa_pcm_plugins_copy
75 alsa_pcm_plugins_dmix alsa_pcm_plugins_dshare alsa_pcm_plugins_dsnoop
76 alsa_pcm_plugins_empty alsa_pcm_plugins_extplug alsa_pcm_plugins_file
77 alsa_pcm_plugins_hooks alsa_pcm_plugins_iec958 alsa_pcm_plugins_ioplug
78 alsa_pcm_plugins_ladspa alsa_pcm_plugins_lfloat
79 alsa_pcm_plugins_linear alsa_pcm_plugins_meter alsa_pcm_plugins_mulaw
80 alsa_pcm_plugins_multi alsa_pcm_plugins_null alsa_pcm_plugins_plug
81 alsa_pcm_plugins_rate alsa_pcm_plugins_route alsa_pcm_plugins_share
82 alsa_pcm_plugins_shm alsa_pcm_plugins_softvol amd64 apache2 arts
83 audiofile avi berkdb bitmap-fonts bzip2 cdr cli cracklib crypt ctype
84 cups cxx dba dlloader dri dvd dvdread eds elibc_glibc emacs emboss
85 encode esd ethereal exif expat fam fastbuild foomaticdb
86 force-cgi-redirect fortran ftp gd gdbm gif glut gmp gnome gpm
87 gstreamer gtk gtk2 gtkhtml iconv idn ieee1394 imlib
88 input_devices_evdev input_devices_keyboard input_devices_mouse ipv6
89 isdnlog java jpeg jpeg2k kde kernel_linux lcms libg++ logrotate lzw
90 lzw-tiff memlimit mng motif mozilla mp3 mpeg ncurses nls nptl nptlonly
91 opengl openntpd pam pcre pdf pdflib perl plotutils png posix ppds pppd
92 python qt qt3 qt4 quicktime readline reflection samba sdl session
93 simplexml soap sockets spell spl ssl tcltk tcpd tiff tokenizer
94 truetype truetype-fonts type1-fonts udev unicode usb userland_GNU
95 userlocales video_cards_fglrx video_cards_radeon video_cards_vesa xml
96 xml2 xorg xpm xsl xv zlib"
97 Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL,
98 LDFLAGS, LINGUAS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
99
100
101 Best regards,
102 mc
103 --
104 gentoo-user@g.o mailing list

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Subject Author
[gentoo-user] Re: MPICH2 and errors.... Marco Calviani <marco.calviani@×××××.com>