[gentoo-alt] RE: emerge sam2p: cannot compute depends

[Han H.]

Hi, 

Thanks for the reply. Unfortunately neither of the patches 
make the configure work. It looks like newer llvm+clang might be the 
problem.

> Date: Sat, 20 Aug 2016 07:49:47 +0200
> From: grobian@g.o
> To: twn@×××××××.com
> CC: gentoo-alt@l.g.o
> Subject: Re: emerge sam2p: cannot compute depends
>
> Maybe related:
>
> https://bugs.gentoo.org/show_bug.cgi?id=585630
> https://bugs.gentoo.org/show_bug.cgi?id=537668
>
> Thanks,
> Fabian
>
> On 19-08-2016 21:49:01 +0000, Han H. wrote:
> > Hi,
> >
> > I encountered an compile error on the way to install texlive.  The emerge of
> > media-gfx/sam2p-0.49.1::gentoo_prefix gets errors with the following
> > message. Any help will be appreciated!
> >
> > OS: El Captain (10.11)
> > llvm+clang: 3.7.1
> >
> > $ emerge -1av sam2p
> >
> > These are the packages that would be merged, in order:
> >
> > Calculating dependencies... done!
> > [ebuild  N     ] media-gfx/sam2p-0.49.1::gentoo_prefix  USE="-examples -gif"
> > 0 KiB
> >
> > Total: 1 package (1 new), Size of downloads: 0 KiB
> >
> > Would you like to merge these packages? [Yes/No] y
> >
> > >>> Verifying ebuild manifests
> >
> > >>> Emerging (1 of 1) media-gfx/sam2p-0.49.1::gentoo_prefix
> >  * sam2p-0.49.1.tar.gz SHA256 SHA512 WHIRLPOOL size ;-)
> > ...                                                                   [ ok ]
> > >>> Unpacking source...
> > >>> Unpacking sam2p-0.49.1.tar.gz to
> > /Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work
> > >>> Source unpacked in
> > /Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work
> > >>> Preparing source in
> > /Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1
> > ...
> >  * Applying sam2p-0.45-fbsd.patch
> > ...
> > [ ok ]
> >  * Applying sam2p-0.49.1-build.patch
> > ...
> > [ ok ]
> >  * Applying sam2p-0.45-locales.patch
> > ...
> > [ ok ]
> >  * Running eautoreconf in
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1'
> > ...
> >  * This package has a configure.in file which has long been deprecated.
> > Please
> >  * update it to use configure.ac instead as newer versions of autotools will
> > die
> >  * when it finds this file.  See https://bugs.gentoo.org/426262 for details.
> > !!! Section 'gentoo' in repos.conf has name different from repository name
> > 'gentoo_prefix' set inside repository
> > !!! Section 'gentoo' in repos.conf has name different from repository name
> > 'gentoo_prefix' set inside repository
> > !!! Section 'gentoo' in repos.conf has name different from repository name
> > 'gentoo_prefix' set inside repository
> >  * Running autoconf
> > ...
> > [ ok ]
> >  * Running autoheader
> > ...
> > [ !! ]
> >  * Running elibtoolize in: sam2p-0.49.1/
> > >>> Source prepared.
> > >>> Configuring source in
> > /Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1
> > ...
> > ./configure --prefix=/Users/abc/gentoo/usr --build=x86_64-apple-darwin15
> > --host=x86_64-apple-darwin15 --mandir=/Users/abc/gentoo/usr/share/man
> > --infodir=/Users/abc/gentoo/usr/share/info
> > --datadir=/Users/abc/gentoo/usr/share --sysconfdir=/Users/abc/gentoo/etc
> > --localstatedir=/Users/abc/gentoo/var/lib --libdir=/Users/abc/gentoo/usr/lib
> > --enable-lzw --disable-gif
> > checking for --enable-debug... assert
> > checking for --enable-lzw... yes
> > checking for --enable-zip... yes
> > checking for --enable-fax... yes
> > checking for --enable-gif... no
> > checking whether the C++ compiler works... yes
> > checking for C++ compiler default output file name... a.out
> > checking for suffix of executables...
> > checking whether we are cross compiling... no
> > checking for suffix of object files... o
> > checking whether we are using the GNU C++ compiler... yes
> > checking whether x86_64-apple-darwin15-clang++ accepts -g... yes
> > checking whether x86_64-apple-darwin15-clang++ accepts -fsigned-char... yes
> > checking whether x86_64-apple-darwin15-clang++ accepts -fno-rtti
> > -fno-exceptions... yes
> > checking whether x86_64-apple-darwin15-clang++ accepts -ansi -pedantic -Wall
> > -W... yes
> > checking whether x86_64-apple-darwin15-clang++ accepts -felide-constructors
> > -Wstrict-prototypes -Wpointer-arith -Wcast-align -Winline -Wcast-qual
> > -Wmissing-prototypes... yes
> > checking for ignored -W -Wall -Wnested-externs -Wbad-function-cast
> > -Wmissing-declarations... no
> > checking whether x86_64-apple-darwin15-clang++ accepts -Wnested-externs
> > -Wbad-function-cast -Wmissing-declarations... yes
> > checking whether gcc can link C++ code... no
> > checking for cjpeg... /Users/abc/gentoo/usr/bin/cjpeg
> > checking for djpeg... /Users/abc/gentoo/usr/bin/djpeg
> > checking for tif22pnm... no
> > configure: WARNING: tif22pnm would provide increased functionality to this
> > program:
> > configure: WARNING: tif22pnm is required for loading TIFF files
> > checking for tifftopnm... no
> > configure: WARNING: tifftopnm would provide increased functionality to this
> > program:
> > configure: WARNING: tifftopnm might become useful for loading TIFF files
> > checking for pngtopnm... no
> > configure: WARNING: pngtopnm would provide increased functionality to this
> > program:
> > configure: WARNING: pngtopnm might become useful for loading PNG files
> > checking for gs... /Users/abc/gentoo/usr/bin/gs
> > checking for lzw_codec... no
> > configure: WARNING: lzw_codec would provide increased functionality to this
> > program:
> > configure: WARNING: lzw_codec might become recommended for /Compression/LZW
> > checking for gzip... /Users/abc/gentoo/bin/gzip
> > checking for zip... /usr/bin/zip
> > checking for bash... /Users/abc/gentoo/bin/bash
> > checking for make... /Users/abc/gentoo/usr/bin/make
> > checking for perl... /Users/abc/gentoo/usr/bin/perl
> > checking how to run the C++ preprocessor... x86_64-apple-darwin15-clang++ -E
> > checking for grep that handles long lines and -e...
> > /Users/abc/gentoo/bin/grep
> > checking for egrep... /Users/abc/gentoo/bin/grep -E
> > checking for ANSI C header files... yes
> > checking whether cc supports prototypes... yes
> > checking whether cc compiles standard C... yes
> > checking for switch(enum) bug... no
> > checking for ASCII system... yes
> > checking for an ANSI C-conforming const... yes
> > checking for C keyword volatile... yes
> > checking whether c++ supports static const... yes
> > checking for working getc in stdio.h... yes
> > checking for working fgetc in stdio.h... yes
> > checking for working putc in stdio.h... yes
> > checking for working fputc in stdio.h... yes
> > checking for working sprintf in stdio.h... yes
> > checking for working atoi in stdlib.h... yes
> > checking for working write in unistd.h... yes
> > checking for working system in stdlib.h... yes
> > checking for working lstat in sys/stat.h... yes
> > checking for working strcpy in string.h... yes
> > checking for working memcpy in string.h... yes
> > checking whether memcmp and memcpy are built-in... no
> > checking for working malloc in stdlib.h... yes
> > checking for sys/types.h... yes
> > checking for sys/stat.h... yes
> > checking for stdlib.h... yes
> > checking for string.h... yes
> > checking for memory.h... yes
> > checking for strings.h... yes
> > checking for inttypes.h... yes
> > checking for stdint.h... yes
> > checking for unistd.h... yes
> > checking for size_t... yes
> > checking for working alloca.h... yes
> > checking for alloca... yes
> > checking for width of printf .g... ".16"
> > checking for tmpdir... "/var/tmp/"
> > checking for binary popen_... yes
> > checking for binary popen_b... (cached) no
> > checking for working vsnprintf... c99
> > checking for working system(3)... unix
> > checking whether char is unsigned... no
> > checking size of char... 1
> > checking size of short... (cached) 2
> > checking size of int... (cached) 4
> > checking size of long... (cached) 8
> > checking size of long long... 8
> > checking size of very long... (cached) 0
> > checking size of __int64... (cached) 0
> > configure: WARNING: cannot find inttype: sizeof(inttype)==16
> > checking size of char *... (cached) 8
> > checking size of void *... 8
> > checking for an integral type to hold a ptr... long
> > checking for ptr <-> integral conversion... yes
> > checking for integral type size_t... unsigned long
> > checking size of bool... 1
> > configure: creating ./config.status
> > config.status: creating Makehelp
> > config.status: creating config.h
> > running gmake Makedep... error
> > configure: error: cannot compute depends
> >
> > !!! Please attach the following file when seeking support:
> > !!!
> > /Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1/config.log
> >  * ERROR: media-gfx/sam2p-0.49.1::gentoo_prefix failed (configure phase):
> >  *   econf failed
> >  *
> >  * Call stack:
> >  *               ebuild.sh, line  133:  Called __call-ebuildshell
> > 'src_configure'
> >  *               ebuild.sh, line  542:  Called src_configure
> >  *             environment, line 2725:  Called econf '--enable-lzw'
> > '--disable-gif'
> >  *        phase-helpers.sh, line  662:  Called __helpers_die 'econf failed'
> >  *   isolated-functions.sh, line  117:  Called die
> >  * The specific snippet of code:
> >  *           die "$@"
> >  *
> >  * If you need support, post the output of `emerge --info
> > '=media-gfx/sam2p-0.49.1::gentoo_prefix'`,
> >  * the complete build log and the output of `emerge -pqv
> > '=media-gfx/sam2p-0.49.1::gentoo_prefix'`.
> >  * The complete build log is located at
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/temp/build.log'.
> >  * The ebuild environment file is located at
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/temp/environment'.
> >  * Working directory:
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1'
> >  * S:
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/work/sam2p-0.49.1'
> >
> > >>> Failed to emerge media-gfx/sam2p-0.49.1, Log file:
> >
> > >>>
> > '/Users/abc/gentoo/var/tmp/portage/media-gfx/sam2p-0.49.1/temp/build.log'
> >
> > $ emerge --info
> > Portage 2.2.28-prefix (python 3.5.1-final-0, prefix/darwin/macos/10.11/x64,
> > clang-3.7.1, unavailable, 15.6.0 x86_64)
> > =================================================================
> > System uname: Darwin-15.6.0-x86_64-i386-64bit
> > Timestamp of repository gentoo_prefix: Fri, 19 Aug 2016 19:27:57 +0000
> > sh bash 4.3_p39
> > app-shells/bash:    4.3_p39::gentoo_prefix
> > dev-lang/perl:      5.24.0-r1::gentoo_prefix
> > dev-lang/python:    2.7.11-r2::gentoo_prefix, 3.4.3-r5::gentoo_prefix,
> > 3.5.1-r3::gentoo_prefix
> > dev-util/cmake:     3.6.1::gentoo_prefix
> > dev-util/pkgconfig: 0.29.1::gentoo_prefix
> > sys-devel/autoconf: 2.69::gentoo_prefix
> > sys-devel/automake: 1.14.1::gentoo_prefix, 1.15::gentoo_prefix
> > sys-devel/libtool:  2.4.6-r1::gentoo_prefix
> > sys-devel/make:     4.2.1::gentoo_prefix
> > Repositories:
> >
> > gentoo_prefix
> >     location: /Users/abc/gentoo/usr/portage
> >     sync-type: rsync
> >     sync-uri: rsync://rsync.prefix.bitzolder.nl/gentoo-portage-prefix
> >     priority: -1000
> >     aliases: gentoo
> >
> > science
> >     location: /Users/abc/gentoo/var/lib/layman/science
> >     masters: gentoo_prefix
> >     priority: 0
> >
> > sage-on-gentoo
> >     location: /Users/abc/gentoo/var/lib/layman/sage-on-gentoo
> >     masters: gentoo_prefix science
> >     priority: 1
> >
> > ACCEPT_KEYWORDS="~x64-macos"
> > ACCEPT_LICENSE="* -@EULA"
> > CBUILD="x86_64-apple-darwin15"
> > CC="x86_64-apple-darwin15-clang"
> > CFLAGS="-march=native -O2 -pipe"
> > CHOST="x86_64-apple-darwin15"
> > CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
> > CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d
> > /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild
> > /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d
> > /etc/texmf/updmap.d /etc/texmf/web2c"
> > CXX="x86_64-apple-darwin15-clang++"
> > CXXFLAGS="-march=native -O2 -pipe"
> > DISTDIR="/Users/abc/gentoo/usr/portage/distfiles"
> > FCFLAGS=""
> > FEATURES="assume-digests binpkg-logs case-insensitive-fs collision-protect
> > config-protect-if-modified distlocks ebuild-locks fixlafiles force-prefix
> > merge-sync news nostrip parallel-fetch preserve-libs protect-owned sfperms
> > strict unknown-features-warn unmerge-logs unmerge-orphans unprivileged
> > userfetch userpriv usersandbox usersync"
> > FFLAGS=""
> > GENTOO_MIRRORS="http://distfiles.gentoo.org"
> > LDFLAGS="-Wl,-dead_strip_dylibs"
> > MAKEOPTS="-j5"
> > PKGDIR="/Users/abc/gentoo/usr/portage/packages"
> > PORTAGE_CONFIGROOT="/Users/abc/gentoo/"
> > PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times
> > --omit-dir-times --compress --force --whole-file --delete --stats
> > --human-readable --timeout=180 --exclude=/distfiles --exclude=/local
> > --exclude=/packages --exclude=/.git"
> > PORTAGE_TMPDIR="/Users/abc/gentoo/var/tmp"
> > USE="aqua coreaudio cracklib cxx ipv6 mmx mmxext modules ncurses nls objc
> > objc++ prefix prefix-guest readline sse sse2 ssl unicode x64-macos zlib"
> > ABI_X86="64" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd
> > actions alias auth_basic authn_alias authn_anon authn_dbm authn_default
> > authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner
> > authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir
> > disk_cache env expires ext_filter file_cache filter headers include info
> > log_config logio mem_cache mime mime_magic negotiation rewrite setenvif
> > speling status unique_id userdir usertrack vhost_alias"
> > CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon
> > braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load
> > memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2"
> > ELIBC="Darwin" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin
> > garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle
> > oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox
> > ubx" INPUT_DEVICES="keyboard mouse" KERNEL="Darwin" L10N="en"
> > LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb
> > ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer"
> > OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5"
> > PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4
> > python3_5" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU"
> > XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p
> > iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark
> > dhcpmac delude chaos account"
> > Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL,
> > PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS,
> > PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
> >
> > Many thanks,
> > Han
> >
>
> --
> Fabian Groffen
> Gentoo on a different level

Han