Gentoo Archives: gentoo-science

From: Donnie Berkholz <dberkholz@g.o>
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] mpb: dependencies require two mpi implementations
Date: Wed, 17 Jan 2007 18:42:53
Message-Id: 45AE6ED3.4000003@gentoo.org
In Reply to: [gentoo-science] mpb: dependencies require two mpi implementations by Alessandro Yoshi Polliotti
1 Alessandro Yoshi Polliotti wrote:
2 > These two libs need different mpi implementations, and both are needed for
3 > mpb:
4 >
5 > [ebuild N ] sci-libs/hdf5-1.6.4 USE="mpi ssl
6 > zlib -debug -hlapi -static -szip -threads" 4,748 kB
7 > needs mpich2
8 >
9 > [ebuild NS ] sci-libs/fftw-2.1.5-r2 USE="mpi" 1,227 kB
10 > needs lam-mpi
11 >
12 > Needless to say, the two implementations block each other.
13 > I assume that both of them are quite computationally intensive since they have
14 > mpi support. The question is: which one of the libraries should I compile
15 > with mpi support, given that they will be used with mpb?
16 >
17 > ps: thanks for helping me solve the previous problems.
18
19 Use hdf5 1.6.5, it allows any MPI implementation.
20
21 Thanks,
22 Donnie
23 --
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